Detailed information of deep learning profile BP000612.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000612.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DLZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.06 0.00 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.07 0.00 0.07 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 816 761 727 800 765 802 782 695 759 743 728 713 754 714 724 662 704 733 733 762 871 839 474 160 2640 1 34 40 45 410 644 537 696 639 654 781 814 785 724 738 740 718 737 729 801 753 730 728 751 773 ]
C [ 1387 1398 1393 1410 1328 1362 1327 1385 1413 1342 1383 1395 1431 1487 1505 1404 1474 1482 1394 1498 1337 822 3084 3983 43 4219 5 218 17 1633 1147 1746 1470 1462 1333 1367 1385 1280 1318 1395 1239 1443 1367 1388 1376 1340 1375 1432 1310 1363 ]
G [ 1288 1334 1373 1282 1385 1326 1307 1394 1334 1369 1406 1341 1283 1324 1297 1426 1267 1337 1462 1303 1418 2068 434 60 1163 3 4187 49 4145 1502 1169 1047 1353 1382 1529 1382 1292 1416 1487 1307 1470 1342 1372 1368 1305 1348 1342 1329 1371 1356 ]
T [ 737 735 735 736 750 738 812 754 722 774 711 779 760 703 702 736 783 676 639 665 602 499 236 25 382 5 2 3921 21 683 1268 898 709 745 712 698 737 747 699 788 779 725 752 743 746 787 781 739 796 736 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 0.00 0.00 0.04 -0.06 0.03 -0.01 -0.04 -0.02 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 0.02 0.06 -0.06 0.08 -0.06 0.04 -0.04 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.01 -0.04 0.04 -0.06 0.07 -0.06 0.07 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.04 -0.01 0.03 -0.06 0.05 0.00 0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1692

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1533

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1109

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages