Detailed information of deep learning profile BP000609.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000609.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DLN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.05 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.06 0.00 0.08 0.00 0.01 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.08 -0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 177 183 168 177 181 161 165 194 155 184 150 150 184 190 200 207 257 165 3 846 0 3 105 10 42 124 174 131 127 171 168 175 158 167 180 165 158 174 168 173 183 134 160 172 176 166 168 142 172 163 ]
C [ 280 292 283 282 282 276 310 279 324 251 312 311 305 267 251 225 256 311 901 1 903 0 222 16 117 418 288 263 292 274 288 284 286 271 255 276 284 296 284 309 247 288 315 264 287 285 274 294 293 272 ]
G [ 298 282 282 297 288 304 267 275 274 294 286 274 275 305 292 365 272 378 7 59 0 912 3 824 636 163 262 338 308 313 297 281 326 314 292 299 288 277 293 262 297 324 274 290 291 278 294 305 284 290 ]
T [ 160 158 182 159 164 174 173 167 162 186 167 180 151 153 172 118 130 61 4 9 12 0 585 65 120 210 191 183 188 157 162 175 145 163 188 175 185 168 170 171 188 169 166 189 161 186 179 174 166 190 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 -0.00 -0.01 0.05 -0.04 0.02 -0.01 -0.03 -0.02 -0.01 0.00 -0.01 ]
C [ 0.00 -0.00 -0.00 0.00 0.06 -0.08 0.08 -0.09 0.03 -0.04 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.05 0.03 -0.09 0.08 -0.08 0.05 0.01 -0.01 -0.00 -0.00 ]
T [ -0.01 -0.00 -0.01 -0.02 -0.03 -0.01 0.02 -0.04 0.04 -0.01 -0.00 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 310

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 273

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 47

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages