Detailed information of deep learning profile BP000565.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000565.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR447ZMS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.07 0.07 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.01 0.01 -0.00 0.06 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.07 0.03 0.00 0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5500 5623 5494 5537 5896 6107 5733 5733 5774 6857 5595 5986 5529 5986 5764 5622 6674 6136 5753 6786 5749 5880 9846 59 114 7910 3301 174 4269 20862 21057 686 7211 5682 4427 5610 5609 5156 5627 5833 7072 5693 5841 5519 5512 6705 6731 5627 5640 5632 ]
C [ 4865 4251 4133 4307 4761 4318 5118 5264 5297 4150 4411 4176 5432 4363 4165 4264 4615 4321 4518 3329 4988 2678 2999 97 67 243 4932 92 13822 231 9 5104 6744 4807 5928 4624 4213 5760 4613 5359 4226 5096 4190 4366 5605 4335 4267 5159 5399 4302 ]
G [ 4469 4530 5502 4392 4226 4766 4318 4363 4390 4595 5458 5316 4182 4111 5208 5611 4627 5475 4524 6425 5276 5830 7454 32 7874 8321 2590 20766 8 0 7 2729 2898 4141 3844 4814 5586 4737 4318 4306 4395 4420 4150 5416 4088 4382 4492 4449 4194 4275 ]
T [ 6266 6696 5971 6864 6217 5909 5931 5740 5639 5498 5636 5622 5957 6640 5963 5603 5184 5168 6305 4560 5087 6712 801 20912 13045 4626 10277 68 3001 7 27 12581 4247 6470 6901 6052 5692 5447 6542 5602 5407 5891 6919 5799 5895 5678 5610 5865 5867 6891 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.02 -0.04 -0.05 0.02 -0.02 -0.01 0.01 0.07 0.07 -0.03 0.01 0.00 -0.01 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.02 -0.04 -0.06 0.05 -0.02 0.04 0.01 -0.04 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.04 0.02 0.03 -0.02 0.06 -0.07 -0.04 -0.03 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.03 0.07 0.05 0.01 0.01 -0.02 0.02 -0.05 -0.03 0.03 -0.01 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4549

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1405

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 312

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 172

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 150

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages