Detailed information of deep learning profile BP000563.1

  1. Home
  2. Deep Learning Profile > BP000563.1
This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000563.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR375BUB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.08 0.09 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.04 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.01 0.02 -0.00 0.08 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.08 0.04 0.00 0.00 -0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5976 6045 5935 5899 6387 6979 6091 6176 6208 8114 6212 6484 5931 6485 6160 5999 7911 6557 6005 7284 6227 7209 10875 51 121 8711 3371 69 4831 22999 23436 594 7777 6264 4654 6175 5996 5571 6040 6155 8355 6063 6211 5964 5991 8015 7899 6043 6022 6096 ]
C [ 5899 4575 4411 4602 5548 4629 6212 6330 6672 4396 4581 4455 6681 4658 4377 4527 4963 4639 5016 3553 6133 2826 3066 84 76 188 5921 60 15027 449 2 5729 8282 5194 6986 5014 4604 7234 4945 6655 4528 6206 4631 4605 6701 4637 4504 6291 6536 4533 ]
G [ 4718 4850 6669 4849 4498 5355 4693 4634 4587 4861 6580 6520 4547 4430 6528 6743 5036 6718 4948 7761 5677 6336 8695 35 8983 9442 2612 23258 14 0 4 2898 2847 4154 3978 5684 6774 4780 4505 4525 4662 4781 4358 6654 4541 4544 4982 4660 4500 4469 ]
T [ 6856 7979 6434 8099 7016 6486 6453 6309 5982 6078 6076 5990 6290 7876 6384 6180 5539 5535 7480 4851 5412 7078 813 23279 14269 5108 11545 62 3577 1 7 14228 4543 7837 7831 6576 6075 5864 7959 6114 5904 6399 8249 6226 6216 6253 6064 6455 6391 8351 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.03 -0.05 -0.06 0.03 -0.03 -0.01 0.02 0.08 0.09 -0.04 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.03 -0.05 -0.07 0.07 -0.03 0.05 0.01 -0.05 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.05 0.03 0.03 -0.03 0.08 -0.09 -0.05 -0.04 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 -0.03 0.08 0.06 0.02 0.01 -0.02 0.02 -0.07 -0.05 0.03 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5007

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1278

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1025

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 75

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 27

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages