Detailed information of deep learning profile BP000551.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000551.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000DYI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 0.00 0.00 0.01 0.00 0.05 0.10 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.12 -0.00 0.03 0.02 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.05 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.00 0.12 0.10 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 7489 9227 7839 7836 7394 7596 7646 7913 8542 7525 7036 7164 8334 7378 7209 8035 9634 7958 4163 17797 9 4 3771 16 16390 4309 15442 25692 604 9785 7226 5949 8032 6980 7202 7916 8041 8420 7802 7297 7869 6980 7218 7615 8102 7987 8076 9041 7750 8549 ]
C [ 4882 4680 4786 4955 5188 4884 4858 5896 4714 5079 4909 4768 4943 4859 6101 5159 3973 4132 3164 2118 6 5 12 25997 2105 11038 10377 105 8245 6807 5912 7072 4971 6317 5156 6115 6003 4744 4643 6011 5935 5593 4763 4860 4884 5342 4761 5010 6571 5446 ]
G [ 6353 4971 6330 5983 4895 5082 6697 4836 4936 5956 5278 6116 5577 6930 4863 5626 6337 5323 7807 5760 5 570 16829 77 4904 232 101 133 2261 2933 5318 3892 5437 4812 5350 4923 4673 4964 6326 4762 4956 4708 6042 5890 5829 4940 5315 5130 4628 4811 ]
T [ 7388 7234 7157 7338 8635 8550 6911 7467 7920 7552 8889 8064 7258 6945 7939 7292 6168 8699 10978 437 26092 25533 5500 22 2713 10533 192 182 15002 6587 7656 9199 7672 8003 8404 7158 7395 7984 7341 8042 7352 8831 8089 7747 7297 7843 7960 6931 7163 7306 ]

Hypothetical CWM

   
A [ 0.00 0.01 -0.00 -0.01 0.05 -0.07 -0.09 0.03 -0.03 0.01 0.01 0.07 0.10 -0.05 0.01 0.00 -0.01 -0.00 ]
C [ 0.01 0.00 0.01 -0.00 0.00 -0.04 -0.06 -0.11 0.12 -0.03 0.05 0.05 -0.05 0.04 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.02 0.01 0.02 0.04 -0.06 0.02 0.08 -0.04 0.10 -0.08 -0.06 -0.03 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.02 -0.06 0.12 0.10 0.01 -0.00 -0.04 0.04 -0.07 -0.07 0.04 -0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2344

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 521

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 414

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 377

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 27

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages