Detailed information of deep learning profile BP000551.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000551.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000DYI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.10 0.12 -0.00 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.05 0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.02 0.03 -0.00 0.12 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.10 0.05 0.00 0.01 0.00 0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 7306 7163 6931 7960 7843 7297 7747 8089 8831 7352 8042 7341 7984 7395 7158 8404 8003 7672 9199 7656 6587 15002 182 192 10533 2713 22 5500 25533 26092 437 10978 8699 6168 7292 7939 6945 7258 8064 8889 7552 7920 7467 6911 8550 8635 7338 7157 7234 7388 ]
C [ 4811 4628 5130 5315 4940 5829 5890 6042 4708 4956 4762 6326 4964 4673 4923 5350 4812 5437 3892 5318 2933 2261 133 101 232 4904 77 16829 570 5 5760 7807 5323 6337 5626 4863 6930 5577 6116 5278 5956 4936 4836 6697 5082 4895 5983 6330 4971 6353 ]
G [ 5446 6571 5010 4761 5342 4884 4860 4763 5593 5935 6011 4643 4744 6003 6115 5156 6317 4971 7072 5912 6807 8245 105 10377 11038 2105 25997 12 5 6 2118 3164 4132 3973 5159 6101 4859 4943 4768 4909 5079 4714 5896 4858 4884 5188 4955 4786 4680 4882 ]
T [ 8549 7750 9041 8076 7987 8102 7615 7218 6980 7869 7297 7802 8420 8041 7916 7202 6980 8032 5949 7226 9785 604 25692 15442 4309 16390 16 3771 4 9 17797 4163 7958 9634 8035 7209 7378 8334 7164 7036 7525 8542 7913 7646 7596 7394 7836 7839 9227 7489 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.01 0.04 -0.07 -0.07 0.04 -0.04 -0.00 0.01 0.10 0.12 -0.06 0.02 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.03 -0.06 -0.08 0.10 -0.04 0.08 0.02 -0.06 0.04 0.02 0.01 0.02 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.04 -0.05 0.05 0.05 -0.03 0.12 -0.11 -0.06 -0.04 0.00 -0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.01 0.00 0.01 -0.05 0.10 0.07 0.01 0.01 -0.03 0.03 -0.09 -0.07 0.05 -0.01 -0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2344

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 521

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 414

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 377

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 27

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages