Detailed information of deep learning profile BP000545.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000545.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BRQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.09 0.11 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.05 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.02 0.02 -0.00 0.10 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.10 0.04 0.00 0.01 -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5247 5412 5323 5270 5693 6240 5342 5544 5607 7001 5405 5725 5339 5552 5436 5348 6870 5692 5324 6409 5656 6168 9969 30 103 8998 2303 68 3383 20889 21377 322 7345 5808 4188 5568 5543 4817 5345 5755 7552 5485 5454 5336 5162 6982 6720 5161 5362 5404 ]
C [ 5501 4478 4245 4313 5262 4353 5676 5789 5922 4221 4461 4313 6116 4575 4228 4370 4687 4335 4679 3503 5400 2516 3013 67 71 174 5624 55 15286 487 2 5854 7447 4786 6577 4924 4437 6436 4807 6074 4483 5823 4529 4490 6244 4355 4329 5799 5882 4456 ]
G [ 4694 4670 6254 4652 4350 5021 4606 4494 4565 4947 6153 6082 4424 4441 5984 6309 4823 6391 4913 7214 5537 6420 7916 27 9500 8448 2059 21227 1 5 8 2851 2775 4419 3871 5203 6120 5064 4493 4299 4279 4463 4341 6054 4350 4565 4897 4748 4520 4370 ]
T [ 5948 6830 5568 7155 6085 5776 5766 5563 5296 5221 5371 5270 5511 6822 5742 5363 5010 4972 6474 4264 4797 6286 492 21266 11716 3770 11404 40 2720 9 3 12363 3823 6377 6754 5695 5290 5073 6745 5262 5076 5619 7066 5510 5634 5488 5444 5682 5626 7160 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.00 0.04 -0.05 -0.05 0.04 -0.03 -0.00 0.02 0.09 0.11 -0.05 0.02 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 -0.02 -0.05 -0.07 0.08 -0.04 0.06 -0.00 -0.05 0.03 0.02 0.01 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.02 0.03 -0.05 0.03 0.03 -0.03 0.10 -0.10 -0.05 -0.03 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.04 0.10 0.06 0.02 0.01 -0.02 0.03 -0.06 -0.06 0.04 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7052

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2066

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 704

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 222

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 72

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 25

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages