Detailed information of deep learning profile BP000538.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000538.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR720DXT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.04 0.00 0.02 -0.00 0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.08 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.06 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.04 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.09 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.00 0.06 0.01 0.00 0.01 -0.00 0.00 0.00 ]

Frequency matrix

A [ 2375 2256 2322 2449 2397 2500 2378 2385 2443 2381 2437 2327 2253 2338 2495 2621 2773 2795 3512 1804 3044 7031 15 5422 1529 2885 3262 622 6 54 2162 38 1296 2021 2201 2160 2488 2345 2309 2438 2405 2267 2318 2368 2331 2528 2441 2391 2425 2407 ]
C [ 1945 2065 1946 1891 1997 1965 1963 1997 2048 2020 1961 1820 1828 1859 1747 1937 2028 1706 490 175 1559 350 8622 457 2023 1514 1969 456 0 25 1501 8554 2846 1984 1186 1807 2222 2178 2107 1846 1907 1865 1845 1893 1911 1894 1998 1890 1931 1940 ]
G [ 1973 1885 1983 1960 1912 1971 1957 1954 1799 1790 1898 2030 2230 2182 2012 1981 1563 2176 3211 5220 2054 504 24 739 2944 1703 2070 66 8677 4 823 10 94 2087 2379 2334 1718 1845 1980 1876 1989 2106 2131 2043 2080 1914 1942 2043 1944 1940 ]
T [ 2392 2479 2434 2385 2379 2249 2387 2349 2395 2494 2389 2508 2374 2306 2431 2146 2321 2008 1472 1486 2028 800 24 2067 2189 2583 1384 7541 2 8602 4199 83 4449 2593 2919 2384 2257 2317 2289 2525 2384 2447 2391 2381 2363 2349 2304 2361 2385 2398 ]

Hypothetical CWM

A [ -0.00 0.00 0.00 0.00 0.01 -0.00 0.01 0.05 -0.05 0.03 -0.00 0.01 0.01 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 -0.04 -0.01 -0.03 0.08 -0.03 0.01 -0.00 -0.00 0.02 -0.03 -0.02 -0.00 0.06 0.02 0.01 -0.01 0.00 0.01 ]
G [ 0.00 0.00 -0.00 0.01 0.02 0.05 0.00 -0.02 -0.02 0.02 0.01 0.00 0.01 -0.04 0.09 -0.04 -0.01 -0.05 -0.02 0.01 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.01 0.01 -0.00 0.03 -0.05 0.06 0.01 -0.01 0.02 0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4537

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4035

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1137

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1089

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1079

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 956

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 496

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 380

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 70

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 50

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 50

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 34

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000523.1 NR3C1 ENCSR000BHE A549 Homo sapiens MA0113.4
BP000524.1 NR3C1 ENCSR000BHF A549 Homo sapiens MA0113.4
BP000525.1 NR3C1 ENCSR000BHG A549 Homo sapiens MA0113.4
BP000526.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens MA0113.4
BP000527.1 NR3C1 ENCSR000BJR A549 Homo sapiens MA0113.4
BP000528.1 NR3C1 ENCSR070VXO A549 Homo sapiens MA0113.4
BP000529.1 NR3C1 ENCSR255CTA A549 Homo sapiens MA0113.4
BP000530.1 NR3C1 ENCSR287FWE A549 Homo sapiens MA0113.4
BP000531.1 NR3C1 ENCSR385RUW A549 Homo sapiens MA0113.4
BP000532.1 NR3C1 ENCSR424JOE A549 Homo sapiens MA0113.4
Showing 10 profiles of page 1 from 2 pages