Detailed information of deep learning profile BP000534.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000534.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR471EKW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.04 -0.00 0.02 -0.00 0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.08 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.06 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.04 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.09 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.00 0.06 0.01 0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

A [ 3114 3006 3025 3217 3157 3257 3091 3154 3110 3169 3159 3061 3083 3130 3168 3551 3646 3715 4570 2125 4210 9892 16 7281 2046 3945 4517 748 3 74 2804 45 1556 2539 2915 2797 3208 3107 3116 3223 3101 3027 3105 3130 3146 3266 3206 3109 3197 3199 ]
C [ 2551 2726 2567 2557 2714 2564 2679 2740 2731 2653 2587 2401 2430 2385 2388 2561 2886 2509 627 178 1951 314 11280 553 2674 2034 2801 676 2 20 1903 11386 3651 2717 1499 2523 3105 2878 2807 2502 2552 2491 2498 2585 2520 2582 2680 2663 2615 2547 ]
G [ 2757 2538 2649 2717 2598 2596 2635 2562 2547 2436 2535 2695 3026 2974 2890 2617 2055 2673 4276 7576 2805 519 143 1134 3982 2215 2488 50 11539 3 1148 3 183 2862 3076 3165 2234 2534 2540 2444 2715 2793 2829 2735 2747 2562 2657 2739 2582 2609 ]
T [ 3123 3275 3304 3054 3076 3128 3140 3089 3157 3287 3264 3388 3006 3056 3099 2816 2958 2648 2072 1666 2579 820 106 2577 2843 3351 1739 10071 1 11448 5690 111 6155 3427 4055 3060 2998 3026 3082 3376 3177 3234 3113 3095 3132 3135 3002 3034 3151 3190 ]

Hypothetical CWM

A [ 0.00 0.00 -0.00 0.01 -0.01 0.01 0.05 -0.04 0.03 -0.00 0.01 0.01 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.01 0.01 -0.01 -0.04 -0.00 -0.03 0.08 -0.03 0.01 0.00 0.00 0.03 -0.03 -0.02 0.00 0.06 0.02 0.01 -0.01 0.00 0.01 ]
G [ 0.00 -0.00 0.01 0.02 0.05 0.00 -0.02 -0.02 0.02 0.01 0.00 0.01 -0.04 0.09 -0.04 -0.01 -0.04 -0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.01 0.01 -0.00 0.03 -0.05 0.06 0.01 -0.00 0.02 -0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 11609

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3826

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2490

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1521

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1120

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 673

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 660

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 649

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 606

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 575

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 255

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 248

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 107

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 65

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 55

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 49

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 39

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000523.1 NR3C1 ENCSR000BHE A549 Homo sapiens MA0113.4
BP000524.1 NR3C1 ENCSR000BHF A549 Homo sapiens MA0113.4
BP000525.1 NR3C1 ENCSR000BHG A549 Homo sapiens MA0113.4
BP000526.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens MA0113.4
BP000527.1 NR3C1 ENCSR000BJR A549 Homo sapiens MA0113.4
BP000528.1 NR3C1 ENCSR070VXO A549 Homo sapiens MA0113.4
BP000529.1 NR3C1 ENCSR255CTA A549 Homo sapiens MA0113.4
BP000530.1 NR3C1 ENCSR287FWE A549 Homo sapiens MA0113.4
BP000531.1 NR3C1 ENCSR385RUW A549 Homo sapiens MA0113.4
BP000532.1 NR3C1 ENCSR424JOE A549 Homo sapiens MA0113.4
Showing 10 profiles of page 1 from 2 pages