Detailed information of deep learning profile BP000533.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000533.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR458VTP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.01 0.00 0.01 0.07 0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.10 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.04 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.07 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.09 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 0.00 -0.00 0.02 0.00 0.05 0.00 -0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

A [ 3476 3471 3383 3379 3473 3482 3436 3528 3624 3563 3739 3471 3455 3337 3412 4408 3611 7134 82 6150 12655 1 11129 2103 3784 3215 2967 23 869 2747 1908 2059 3003 3251 3119 3447 3348 3393 3673 3548 3634 3520 3377 3492 3455 3501 3421 3582 3573 3579 ]
C [ 2952 2862 3021 2917 2813 3029 3007 3104 3086 2992 2820 2849 2709 2426 3417 3283 3322 166 3 1208 5 12785 44 2787 2354 4359 1078 30 536 3060 8136 5246 3056 2259 2843 3049 3222 3304 3049 2856 2685 2657 2848 2870 2917 2818 2997 2945 2921 2886 ]
G [ 2854 2982 2929 2968 2876 2820 2894 2774 2771 2842 2825 3126 3193 3411 2841 1748 2970 3600 12669 2355 40 0 810 2987 2263 3011 619 12722 357 2185 206 680 2495 3270 3019 2684 2779 2725 2664 2882 2975 3143 3104 3076 2794 2969 2866 2862 2992 2822 ]
T [ 3505 3472 3454 3523 3625 3456 3450 3381 3306 3390 3403 3341 3430 3613 3117 3348 2884 1887 33 3074 87 1 804 4910 4386 2202 8123 12 11025 4795 2537 4802 4233 4007 3806 3607 3438 3365 3401 3501 3493 3467 3458 3349 3621 3499 3503 3398 3301 3500 ]

Hypothetical CWM

A [ -0.00 0.00 0.01 0.00 0.02 -0.00 0.02 0.07 -0.06 0.04 -0.00 0.01 0.01 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.02 -0.05 -0.01 -0.04 0.10 -0.04 0.01 0.00 0.01 0.02 -0.01 -0.02 0.01 0.06 0.02 0.01 -0.00 0.01 0.01 ]
G [ 0.01 0.01 -0.01 0.01 0.02 0.07 0.00 -0.02 -0.02 0.03 0.00 0.00 0.01 -0.03 0.09 -0.03 -0.01 -0.05 -0.01 0.01 0.01 0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.01 0.01 -0.00 0.03 -0.06 0.06 0.01 -0.00 0.02 0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 10021

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3603

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1240

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1220

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1160

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1051

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 999

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 915

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 566

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 468

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 432

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 431

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 198

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 116

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 95

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 53

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 45

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 40

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 32

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 31

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000523.1 NR3C1 ENCSR000BHE A549 Homo sapiens MA0113.4
BP000524.1 NR3C1 ENCSR000BHF A549 Homo sapiens MA0113.4
BP000525.1 NR3C1 ENCSR000BHG A549 Homo sapiens MA0113.4
BP000526.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens MA0113.4
BP000527.1 NR3C1 ENCSR000BJR A549 Homo sapiens MA0113.4
BP000528.1 NR3C1 ENCSR070VXO A549 Homo sapiens MA0113.4
BP000529.1 NR3C1 ENCSR255CTA A549 Homo sapiens MA0113.4
BP000530.1 NR3C1 ENCSR287FWE A549 Homo sapiens MA0113.4
BP000531.1 NR3C1 ENCSR385RUW A549 Homo sapiens MA0113.4
BP000532.1 NR3C1 ENCSR424JOE A549 Homo sapiens MA0113.4
Showing 10 profiles of page 1 from 2 pages