Detailed information of deep learning profile BP000529.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000529.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR255CTA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.04 -0.00 0.02 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.06 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.05 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 689 671 696 701 662 666 714 664 710 709 749 698 672 634 673 945 786 1502 36 1295 2485 3 2104 410 764 608 503 42 259 606 365 479 637 717 589 701 691 702 713 715 735 718 695 711 669 707 676 724 741 673 ]
C [ 581 587 578 593 565 612 588 635 612 583 560 557 521 495 722 662 636 16 3 225 1 2536 28 624 484 900 184 28 85 574 1705 1027 663 470 558 582 617 643 617 581 542 529 566 571 587 583 579 582 547 597 ]
G [ 587 574 572 587 585 584 535 582 563 586 600 604 651 708 572 336 616 694 2486 410 16 2 165 542 432 623 120 2461 89 454 58 135 462 588 595 512 593 575 551 581 604 609 577 577 580 572 578 573 584 588 ]
T [ 696 721 707 672 741 691 716 672 668 675 644 694 709 716 586 610 515 341 28 623 51 12 256 977 873 422 1746 22 2120 919 425 912 791 778 811 758 652 633 672 676 672 697 715 694 717 691 720 674 681 695 ]

Hypothetical CWM

A [ -0.00 0.00 0.00 -0.00 0.01 -0.01 0.01 0.04 -0.03 0.02 -0.01 0.00 0.00 -0.01 -0.01 -0.01 0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.02 -0.03 -0.01 -0.03 0.06 -0.03 0.00 -0.00 0.00 0.01 -0.02 -0.02 -0.00 0.04 0.01 0.00 -0.01 0.00 0.00 ]
G [ 0.00 0.00 -0.01 0.00 0.01 0.04 -0.01 -0.02 -0.02 0.01 -0.00 -0.00 0.00 -0.03 0.05 -0.03 -0.01 -0.03 -0.01 0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.01 -0.00 -0.00 -0.01 -0.01 0.00 -0.01 -0.01 -0.01 0.01 0.00 -0.01 0.02 -0.03 0.04 0.01 -0.01 0.01 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2621

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2134

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 279

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 180

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 174

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000523.1 NR3C1 ENCSR000BHE A549 Homo sapiens MA0113.4
BP000524.1 NR3C1 ENCSR000BHF A549 Homo sapiens MA0113.4
BP000525.1 NR3C1 ENCSR000BHG A549 Homo sapiens MA0113.4
BP000526.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens MA0113.4
BP000527.1 NR3C1 ENCSR000BJR A549 Homo sapiens MA0113.4
BP000528.1 NR3C1 ENCSR070VXO A549 Homo sapiens MA0113.4
BP000530.1 NR3C1 ENCSR287FWE A549 Homo sapiens MA0113.4
BP000531.1 NR3C1 ENCSR385RUW A549 Homo sapiens MA0113.4
BP000532.1 NR3C1 ENCSR424JOE A549 Homo sapiens MA0113.4
BP000533.1 NR3C1 ENCSR458VTP A549 Homo sapiens MA0113.4
Showing 10 profiles of page 1 from 2 pages