Detailed information of deep learning profile BP000489.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000489.1
Cell line/tissue: liver
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR521IID
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.03 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.03 0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 628 663 641 643 643 599 608 616 645 591 633 631 609 636 601 681 680 760 807 1190 442 14 2547 1 782 64 1 111 317 550 505 448 545 610 533 583 605 656 625 605 622 601 624 603 592 588 627 635 631 618 ]
C [ 709 679 700 728 664 748 702 710 685 721 709 673 717 750 759 710 772 714 501 287 739 2651 7 2659 5 151 12 670 1145 897 589 657 687 643 721 699 701 641 685 748 738 752 687 712 722 748 711 652 688 736 ]
G [ 747 749 742 710 750 739 739 748 798 724 730 752 726 734 739 798 830 667 915 880 1235 18 118 6 1895 19 2650 1599 406 528 908 955 886 859 810 768 792 768 810 717 711 729 789 765 786 716 735 763 792 720 ]
T [ 600 593 601 603 627 598 635 610 556 648 612 628 632 564 585 495 402 543 461 327 268 1 12 18 2 2450 21 304 816 709 682 624 566 572 620 634 586 619 564 614 613 602 584 604 584 632 611 634 573 610 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 -0.00 0.02 -0.02 0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.03 -0.02 0.03 -0.02 0.02 -0.01 0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.02 -0.01 0.03 -0.02 0.03 0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 0.01 -0.02 0.02 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7358

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7063

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2307

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1761

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1398

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 899

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 392

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 99

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 82

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 64

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages