Detailed information of deep learning profile BP000490.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000490.1
Cell line/tissue: liver
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR847DIT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.02 0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 0.04 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.02 0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1051 1032 1021 1061 1049 1077 1031 1022 1056 1076 1020 1035 1020 1078 1028 988 1028 1131 1157 1370 1746 712 23 4183 1 4252 8 0 121 525 932 895 866 957 968 931 1017 1059 1020 1078 1021 1110 1044 1116 1088 982 1037 1048 1092 1016 ]
C [ 1209 1227 1182 1167 1118 1115 1150 1202 1179 1134 1177 1213 1112 1086 1243 1329 1338 1334 1272 782 434 1480 4368 0 4387 137 8 0 1468 1585 1335 1119 1197 1125 1098 1167 1190 1168 1138 1097 1187 1055 1171 1148 1146 1142 1141 1141 1122 1168 ]
G [ 1084 1128 1143 1151 1157 1185 1117 1128 1138 1147 1116 1163 1153 1198 1154 1009 1085 1139 971 1322 1687 1906 1 52 0 2 0 4391 2067 601 936 1161 1177 1216 1341 1211 1107 1171 1236 1217 1134 1185 1205 1132 1115 1194 1182 1122 1087 1135 ]
T [ 1048 1005 1046 1013 1068 1015 1094 1040 1019 1035 1079 981 1107 1030 967 1066 941 788 992 918 525 294 0 157 4 1 4376 1 736 1681 1189 1217 1152 1094 985 1083 1078 994 998 1000 1050 1042 972 996 1043 1074 1032 1081 1091 1073 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.03 0.01 -0.02 -0.02 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.03 -0.02 0.04 -0.02 0.01 -0.02 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 0.01 -0.02 0.02 -0.01 0.04 -0.02 0.04 0.01 0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 0.00 -0.03 0.02 -0.01 0.00 0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4565

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3835

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2463

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1908

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1524

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 568

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 526

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 324

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 322

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 320

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 123

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 48

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages