Detailed information of deep learning profile BP000489.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000489.1
Cell line/tissue: liver
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR521IID
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.03 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.03 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 610 573 634 611 632 584 604 584 602 613 614 564 619 586 634 620 572 566 624 682 709 816 304 21 2450 2 18 12 1 268 327 461 543 402 495 585 564 632 628 612 648 556 610 635 598 627 603 601 593 600 ]
C [ 720 792 763 735 716 786 765 789 729 711 717 810 768 792 768 810 859 886 955 908 528 406 1599 2650 19 1895 6 118 18 1235 880 915 667 830 798 739 734 726 752 730 724 798 748 739 739 750 710 742 749 747 ]
G [ 736 688 652 711 748 722 712 687 752 738 748 685 641 701 699 721 643 687 657 589 897 1145 670 12 151 5 2659 7 2651 739 287 501 714 772 710 759 750 717 673 709 721 685 710 702 748 664 728 700 679 709 ]
T [ 618 631 635 627 588 592 603 624 601 622 605 625 656 605 583 533 610 545 448 505 550 317 111 1 64 782 1 2547 14 442 1190 807 760 680 681 601 636 609 631 633 591 645 616 608 599 643 643 641 663 628 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.02 0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.03 -0.02 0.03 -0.01 0.02 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.01 -0.01 0.02 -0.02 0.03 -0.02 0.03 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 0.01 -0.02 0.02 -0.00 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7358

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7063

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2307

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1761

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1398

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 899

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 392

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 99

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 82

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 64

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages