Detailed information of deep learning profile BP000480.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000480.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EEZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.07 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.10 -0.00 0.10 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.12 0.00 0.11 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.07 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 911 886 875 847 936 809 928 829 852 785 903 849 903 844 877 741 889 782 912 1048 631 39 4087 0 0 27 0 1149 530 600 846 755 817 768 852 756 871 888 906 800 933 881 940 891 861 828 927 879 874 820 ]
C [ 1276 1380 1337 1323 1266 1416 1290 1346 1370 1471 1260 1414 1391 1374 1422 1463 1302 1428 1133 1095 2314 4302 1 4343 0 2 1 1369 1629 1556 1468 1467 1266 1486 1380 1370 1279 1288 1315 1425 1284 1397 1299 1304 1327 1421 1310 1291 1307 1386 ]
G [ 1298 1182 1259 1232 1263 1223 1293 1244 1316 1150 1301 1176 1247 1274 1214 1217 1442 1213 1683 1496 713 2 7 0 4343 0 4342 1057 874 963 1184 1209 1340 1222 1273 1248 1394 1212 1278 1204 1277 1171 1236 1188 1301 1183 1165 1233 1304 1191 ]
T [ 859 896 873 942 879 896 833 925 806 938 880 905 803 852 831 923 711 921 616 705 686 1 249 1 1 4315 1 769 1311 1225 846 913 921 868 839 970 800 956 845 915 850 895 869 961 855 912 942 941 859 947 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 -0.00 -0.02 0.07 -0.10 0.04 -0.03 -0.06 0.00 -0.02 -0.01 -0.00 ]
C [ 0.01 0.00 -0.00 0.01 0.10 -0.07 0.10 -0.08 0.02 -0.07 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.01 -0.06 0.03 -0.09 0.12 -0.07 0.11 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 0.00 -0.06 -0.02 0.04 -0.09 0.08 -0.01 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2722

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 803

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages