Detailed information of deep learning profile BP000480.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000480.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EEZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.07 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.11 0.00 0.12 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.10 -0.00 0.10 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.07 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 947 859 941 942 912 855 961 869 895 850 915 845 956 800 970 839 868 921 913 846 1225 1311 769 1 4315 1 1 249 1 686 705 616 921 711 923 831 852 803 905 880 938 806 925 833 896 879 942 873 896 859 ]
C [ 1191 1304 1233 1165 1183 1301 1188 1236 1171 1277 1204 1278 1212 1394 1248 1273 1222 1340 1209 1184 963 874 1057 4342 0 4343 0 7 2 713 1496 1683 1213 1442 1217 1214 1274 1247 1176 1301 1150 1316 1244 1293 1223 1263 1232 1259 1182 1298 ]
G [ 1386 1307 1291 1310 1421 1327 1304 1299 1397 1284 1425 1315 1288 1279 1370 1380 1486 1266 1467 1468 1556 1629 1369 1 2 0 4343 1 4302 2314 1095 1133 1428 1302 1463 1422 1374 1391 1414 1260 1471 1370 1346 1290 1416 1266 1323 1337 1380 1276 ]
T [ 820 874 879 927 828 861 891 940 881 933 800 906 888 871 756 852 768 817 755 846 600 530 1149 0 27 0 0 4087 39 631 1048 912 782 889 741 877 844 903 849 903 785 852 829 928 809 936 847 875 886 911 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 -0.00 -0.01 0.08 -0.09 0.04 -0.02 -0.06 0.00 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.11 -0.07 0.12 -0.09 0.03 -0.06 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.01 -0.07 0.02 -0.08 0.10 -0.07 0.10 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.01 -0.02 0.00 -0.06 -0.03 0.04 -0.10 0.07 -0.02 -0.00 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2722

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 803

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages