Detailed information of deep learning profile BP000478.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000478.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000ECN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.06 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 -0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1136 1068 1149 1117 1071 1142 1109 1004 1087 1043 1059 982 1057 1038 1068 1015 947 954 1099 1114 1212 1541 745 4 5574 0 4 509 0 764 854 877 1016 850 966 1062 1009 985 1036 1147 1079 1039 1114 1026 1079 1081 1042 1017 1059 1051 ]
C [ 1760 1811 1705 1704 1703 1696 1669 1734 1689 1766 1668 1801 1765 1852 1847 1738 1953 1871 1873 1693 1448 1355 1552 5600 0 5602 0 884 1 620 2546 1941 1603 1865 1671 1809 1774 1630 1681 1629 1713 1779 1752 1794 1745 1671 1722 1772 1690 1763 ]
G [ 1681 1692 1696 1693 1784 1734 1726 1795 1740 1775 1864 1741 1781 1732 1683 1833 1685 1751 1747 1944 2082 1967 2211 3 5 0 5603 2 5473 3576 1134 1559 1970 1780 1986 1730 1765 1882 1891 1793 1775 1709 1739 1722 1723 1769 1760 1759 1707 1764 ]
T [ 1030 1036 1057 1093 1049 1035 1103 1074 1091 1023 1016 1083 1004 985 1009 1021 1022 1031 888 856 865 744 1099 0 28 5 0 4212 133 647 1073 1230 1018 1112 984 1006 1059 1110 999 1038 1040 1080 1002 1065 1060 1086 1083 1059 1151 1029 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 -0.00 -0.00 0.04 -0.04 0.02 -0.01 -0.03 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.05 -0.04 0.06 -0.04 0.03 -0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.03 0.03 -0.04 0.06 -0.04 0.05 0.01 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.03 -0.01 0.02 -0.04 0.03 0.00 -0.00 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6094

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2829

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1763

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1544

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1370

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 827

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 33

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages