Detailed information of deep learning profile BP000478.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000478.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000ECN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.04 -0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.06 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1029 1151 1059 1083 1086 1060 1065 1002 1080 1040 1038 999 1110 1059 1006 984 1112 1018 1230 1073 647 133 4212 0 5 28 0 1099 744 865 856 888 1031 1022 1021 1009 985 1004 1083 1016 1023 1091 1074 1103 1035 1049 1093 1057 1036 1030 ]
C [ 1764 1707 1759 1760 1769 1723 1722 1739 1709 1775 1793 1891 1882 1765 1730 1986 1780 1970 1559 1134 3576 5473 2 5603 0 5 3 2211 1967 2082 1944 1747 1751 1685 1833 1683 1732 1781 1741 1864 1775 1740 1795 1726 1734 1784 1693 1696 1692 1681 ]
G [ 1763 1690 1772 1722 1671 1745 1794 1752 1779 1713 1629 1681 1630 1774 1809 1671 1865 1603 1941 2546 620 1 884 0 5602 0 5600 1552 1355 1448 1693 1873 1871 1953 1738 1847 1852 1765 1801 1668 1766 1689 1734 1669 1696 1703 1704 1705 1811 1760 ]
T [ 1051 1059 1017 1042 1081 1079 1026 1114 1039 1079 1147 1036 985 1009 1062 966 850 1016 877 854 764 0 509 4 0 5574 4 745 1541 1212 1114 1099 954 947 1015 1068 1038 1057 982 1059 1043 1087 1004 1109 1142 1071 1117 1149 1068 1136 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 -0.00 0.00 0.03 -0.04 0.02 -0.01 -0.03 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 0.01 0.05 -0.04 0.06 -0.04 0.03 -0.03 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.02 0.03 -0.04 0.06 -0.04 0.05 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.03 -0.01 0.02 -0.04 0.04 -0.00 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6094

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2829

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1763

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1544

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1370

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 827

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 33

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages