Detailed information of deep learning profile BP000477.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000477.1
Cell line/tissue: GM12878
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DZF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 -0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 693 696 734 645 712 678 664 684 678 593 599 677 659 673 606 591 628 666 635 733 995 568 7 3663 0 0 421 0 867 403 588 599 530 680 580 644 618 662 699 658 620 669 699 687 737 697 685 681 682 687 ]
C [ 1204 1141 1164 1202 1156 1157 1183 1163 1154 1210 1223 1197 1241 1274 1146 1296 1318 1196 1189 1163 1131 1120 3688 0 3693 0 6 0 338 1868 1348 1137 1217 1153 1191 1175 1149 1148 1180 1132 1210 1186 1181 1199 1093 1148 1153 1142 1169 1159 ]
G [ 1138 1195 1088 1151 1149 1149 1181 1161 1165 1261 1223 1133 1134 1102 1241 1141 1082 1218 1230 1330 948 1347 0 0 0 3695 4 3613 2025 782 951 1227 1253 1288 1303 1179 1199 1239 1133 1240 1150 1181 1107 1177 1171 1187 1176 1161 1141 1166 ]
T [ 660 663 709 697 678 711 667 687 698 631 650 688 661 646 702 667 667 615 641 469 621 660 0 32 2 0 3264 82 465 642 808 732 695 574 621 697 729 646 683 665 715 659 708 632 694 663 681 711 703 683 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 -0.01 0.04 -0.05 0.02 -0.01 -0.02 -0.00 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.00 0.00 0.05 -0.04 0.05 -0.03 0.02 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.03 0.02 -0.04 0.06 -0.04 0.04 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 0.02 -0.05 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 379

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 141

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages