Detailed information of deep learning profile BP000476.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000476.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DYG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.02 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.04 -0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 299 248 268 230 292 262 263 286 251 233 261 276 324 269 291 238 243 260 344 423 80 0 1214 0 1238 1 0 115 89 207 268 222 271 248 255 258 287 259 278 236 304 302 348 312 288 289 284 288 273 250 ]
C [ 342 371 375 357 353 338 353 314 321 387 399 399 320 327 327 377 422 376 250 109 365 1243 0 1242 4 1 0 316 572 500 334 369 352 366 386 343 326 302 354 419 355 365 347 345 347 354 326 350 347 364 ]
G [ 308 325 334 336 342 311 300 336 434 348 314 310 339 361 335 393 329 331 473 614 525 0 18 0 1 0 1243 651 171 269 352 364 373 367 335 324 341 412 356 340 324 334 316 322 363 365 385 353 346 342 ]
T [ 294 299 266 320 256 332 327 307 237 275 269 258 260 286 290 235 249 276 176 97 273 0 11 1 0 1241 0 161 411 267 289 288 247 262 267 318 289 270 255 248 260 242 232 264 245 235 248 252 277 287 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.02 -0.03 0.01 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 0.00 0.04 -0.03 0.04 -0.03 0.01 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.03 0.05 -0.03 0.04 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.02 -0.01 0.01 -0.04 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5582

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 313

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages