Detailed information of deep learning profile BP000475.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000475.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BVD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.02 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 708 666 584 630 667 632 610 654 617 603 632 705 707 677 587 643 697 788 883 1025 518 6 2676 1 9 38 2 240 290 488 568 533 638 835 573 679 668 678 675 586 688 698 653 666 690 616 700 667 610 663 ]
C [ 699 692 706 694 676 697 699 641 705 686 752 651 659 710 734 726 727 619 451 350 1356 2672 0 1 2 18 1 1104 925 745 601 698 796 589 637 634 676 641 637 726 663 644 704 692 680 664 660 610 695 663 ]
G [ 659 682 717 673 665 663 689 696 706 695 638 657 683 689 670 723 699 699 778 1010 731 0 2 1 2667 0 2670 1012 236 435 776 822 680 692 710 669 660 732 711 715 672 702 685 663 671 723 679 667 694 701 ]
T [ 612 638 671 681 670 686 680 687 650 694 656 665 629 602 687 586 555 572 566 293 73 0 0 2675 0 2622 5 322 1227 1010 733 625 564 562 758 696 674 627 655 651 655 634 636 657 637 675 639 734 679 651 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 -0.00 0.02 -0.03 0.01 -0.01 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 -0.03 0.04 -0.02 0.02 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.02 0.01 -0.03 0.03 -0.03 0.03 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 0.02 -0.02 0.02 -0.00 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5146

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1583

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 38

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages