Detailed information of deep learning profile BP000474.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000474.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BUL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.04 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.05 0.00 0.04 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2571 2544 2523 2595 2500 2447 2449 2334 2557 2566 2482 2466 2544 2349 2444 2448 2336 2420 2442 2592 3060 3809 1768 5 11980 2 105 946 29 1421 1590 2190 2281 2069 2323 2539 2397 2456 2473 2504 2542 2359 2552 2551 2558 2503 2528 2459 2586 2478 ]
C [ 3655 3679 3563 3571 3589 3610 3517 3689 3434 3524 3578 3638 3553 3727 3745 3497 3901 3723 3865 3657 2985 2440 3934 12199 8 8250 14 2246 157 2668 5348 4000 3361 3725 3571 3555 3698 3473 3454 3441 3472 3782 3605 3516 3485 3564 3548 3622 3498 3566 ]
G [ 3473 3526 3683 3556 3658 3630 3678 3557 3712 3683 3805 3656 3566 3713 3555 3930 3515 3729 3824 3753 4212 4307 5345 7 173 62 12092 22 11564 6798 2156 3017 4058 3935 4067 3823 3735 3862 3932 3836 3855 3600 3707 3593 3760 3666 3681 3614 3647 3638 ]
T [ 2512 2462 2442 2489 2464 2524 2567 2631 2508 2438 2346 2451 2548 2422 2467 2336 2459 2339 2080 2209 1954 1655 1164 0 50 3897 0 8997 461 1324 3117 3004 2511 2482 2250 2294 2381 2420 2352 2430 2342 2470 2347 2551 2408 2478 2454 2516 2480 2529 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 -0.04 0.01 -0.01 -0.03 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.05 -0.03 0.05 -0.02 0.02 -0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 -0.03 0.02 -0.02 0.05 -0.03 0.04 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 0.01 -0.04 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3054

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3016

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1726

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 468

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 396

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 132

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 92

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 20

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages