Detailed information of deep learning profile BP000473.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000473.1
Cell line/tissue: Ishikawa
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BTY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 -0.00 0.04 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 0.04 -0.00 0.03 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2789 2662 2703 2669 2515 2726 2663 2621 2553 2776 2655 2678 2682 2521 2565 2713 2656 3512 4353 1567 14 13679 0 1695 1321 50 1330 1887 2656 2588 2469 2683 2680 2614 2524 2691 2708 2655 2525 2810 2746 2824 2870 2707 2631 2751 2690 2713 2639 2552 ]
C [ 4167 4130 4143 4084 4236 4293 4218 4279 4375 4218 4278 4341 4177 4406 4181 4630 4146 3556 2623 3092 13837 2 11302 35 2844 123 2037 6412 4277 3974 4333 4056 4163 4410 4184 4109 4049 4128 4323 4184 4188 4247 4044 4024 4265 4044 4139 4150 4033 4249 ]
G [ 4137 4415 4292 4329 4271 4094 4315 4567 4148 4243 4429 4259 4480 4135 4456 4246 4461 4651 4911 7690 3 123 218 12124 12 13174 8971 2539 3762 4645 4345 4648 4486 4166 4488 4539 4416 4521 4310 4169 4262 4298 4210 4480 4231 4266 4315 4392 4325 4301 ]
T [ 2762 2648 2717 2773 2833 2742 2659 2388 2779 2618 2493 2577 2516 2793 2653 2266 2592 2136 1968 1506 1 51 2335 1 9678 508 1517 3017 3160 2648 2708 2468 2526 2665 2659 2516 2682 2551 2697 2692 2659 2486 2731 2644 2728 2794 2711 2600 2858 2753 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.04 0.00 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.04 -0.03 0.04 -0.03 0.02 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.02 0.04 -0.03 0.04 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 0.01 -0.04 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4825

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1848

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 812

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 790

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 366

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 165

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages