Detailed information of deep learning profile BP000473.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000473.1
Cell line/tissue: Ishikawa
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BTY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.03 -0.00 0.04 -0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.04 -0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2753 2858 2600 2711 2794 2728 2644 2731 2486 2659 2692 2697 2551 2682 2516 2659 2665 2526 2468 2708 2648 3160 3017 1517 508 9678 1 2335 51 1 1506 1968 2136 2592 2266 2653 2793 2516 2577 2493 2618 2779 2388 2659 2742 2833 2773 2717 2648 2762 ]
C [ 4301 4325 4392 4315 4266 4231 4480 4210 4298 4262 4169 4310 4521 4416 4539 4488 4166 4486 4648 4345 4645 3762 2539 8971 13174 12 12124 218 123 3 7690 4911 4651 4461 4246 4456 4135 4480 4259 4429 4243 4148 4567 4315 4094 4271 4329 4292 4415 4137 ]
G [ 4249 4033 4150 4139 4044 4265 4024 4044 4247 4188 4184 4323 4128 4049 4109 4184 4410 4163 4056 4333 3974 4277 6412 2037 123 2844 35 11302 2 13837 3092 2623 3556 4146 4630 4181 4406 4177 4341 4278 4218 4375 4279 4218 4293 4236 4084 4143 4130 4167 ]
T [ 2552 2639 2713 2690 2751 2631 2707 2870 2824 2746 2810 2525 2655 2708 2691 2524 2614 2680 2683 2469 2588 2656 1887 1330 50 1321 1695 0 13679 14 1567 4353 3512 2656 2713 2565 2521 2682 2678 2655 2776 2553 2621 2663 2726 2515 2669 2703 2662 2789 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.04 0.01 -0.02 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 -0.00 0.01 0.04 -0.03 0.04 -0.02 0.02 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.03 0.04 -0.03 0.04 0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 0.00 -0.04 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4825

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1848

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 812

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 790

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 366

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 165

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages