Detailed information of deep learning profile BP000472.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000472.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BTM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.03 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2173 2155 2171 2089 2159 2137 2109 2057 2193 2062 2061 2106 2074 1976 2255 2122 2429 2314 1302 721 6681 1 124 134 4 1302 1910 1543 2143 1808 1998 2038 2063 1980 1996 2177 2159 1959 2072 2051 2160 2195 2066 2097 2188 2141 2173 2166 2059 2065 ]
C [ 3531 3696 3602 3654 3519 3535 3540 3795 3608 3886 3631 3900 3650 3870 3551 3937 3210 2496 7288 10504 17 11415 2 117 7 5407 3342 4239 3712 3827 3680 3262 3984 3304 3836 3444 3569 3694 3601 3668 3594 3592 3605 3721 3499 3648 3522 3539 3551 3598 ]
G [ 3593 3521 3455 3447 3619 3606 3745 3443 3498 3354 3709 3375 3591 3527 3692 3421 3862 4990 1817 155 3390 2 11312 11 11395 2991 2808 3166 3509 3616 3687 4094 3253 4049 3465 3654 3615 3539 3596 3565 3692 3505 3588 3454 3485 3476 3636 3452 3623 3596 ]
T [ 2142 2067 2211 2249 2142 2161 2045 2144 2140 2137 2038 2058 2124 2066 1941 1959 1938 1639 1032 59 1351 21 1 11177 33 1739 3379 2491 2075 2188 2074 2045 2139 2106 2142 2164 2096 2247 2170 2155 1993 2147 2180 2167 2267 2174 2108 2282 2206 2180 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.04 0.01 -0.01 -0.02 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.03 -0.03 0.04 -0.02 0.02 -0.03 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.02 0.02 -0.03 0.04 -0.03 0.04 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.01 0.01 -0.04 0.03 -0.00 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6013

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1923

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1080

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 74

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages