Detailed information of deep learning profile BP000470.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000470.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BSJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.06 0.00 0.07 -0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.04 0.00 0.07 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.05 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3889 3664 3764 3672 3738 3648 3666 3439 3674 3582 3709 3554 3763 3546 3611 3638 3345 3463 3702 3633 4709 5223 1601 704 13086 7 7230 121 8 1092 2484 2918 3567 3205 3453 3852 3536 3635 3561 3750 3646 3541 3840 3877 3843 3813 3713 3687 3776 3608 ]
C [ 5673 5805 5416 5539 5586 5474 5578 5927 5651 5704 5685 5771 5610 5765 6013 5567 6054 5843 5741 6173 4560 2701 10737 17466 74 18326 628 174 12 9157 6499 6361 5482 5634 5826 5386 5829 5538 5570 5318 5460 5716 5507 5450 5532 5598 5564 5765 5425 5680 ]
G [ 5256 5282 5642 5287 5543 5388 5385 5347 5334 5329 5504 5397 5249 5532 5263 5577 5240 5487 5648 5164 6053 8268 4501 164 3448 32 10554 14 18374 5923 3210 4902 5534 5841 5687 5713 5336 5731 5585 5494 5690 5491 5399 5516 5566 5420 5551 5423 5405 5391 ]
T [ 3602 3669 3598 3922 3553 3910 3791 3707 3761 3805 3522 3698 3798 3577 3533 3638 3781 3627 3329 3450 3098 2228 1581 86 1812 55 8 18111 26 2248 6227 4239 3837 3740 3454 3469 3719 3516 3704 3858 3624 3672 3674 3577 3479 3589 3592 3545 3814 3741 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.01 0.03 -0.07 0.02 -0.03 -0.03 -0.02 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.02 0.06 -0.04 0.07 -0.02 0.03 -0.04 0.03 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.03 0.03 -0.02 0.07 -0.04 0.07 0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.02 -0.03 -0.02 0.02 -0.08 0.05 -0.01 -0.00 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4167

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 184

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 67

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 34

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages