Detailed information of deep learning profile BP000469.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000469.1
Cell line/tissue: HCT116
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BSH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 753 838 822 773 780 774 773 762 806 827 758 762 742 857 821 781 754 782 813 1171 1285 369 79 3120 0 3339 1 0 152 359 748 752 765 825 769 818 792 786 752 871 774 842 805 923 864 838 768 787 784 781 ]
C [ 922 931 856 906 905 920 930 912 924 880 943 956 971 890 907 906 964 1068 966 571 252 1133 3259 2 3364 19 5 1 1105 1272 991 925 918 823 967 894 872 894 884 872 922 895 881 869 933 846 920 883 911 902 ]
G [ 874 824 887 928 872 910 827 851 872 902 862 868 926 834 880 811 925 869 833 945 1503 1431 19 176 0 4 0 3363 1574 451 706 803 942 931 944 863 898 888 922 882 872 880 892 865 840 920 915 906 903 875 ]
T [ 816 772 800 758 808 761 835 840 763 756 802 779 726 784 757 867 722 646 753 678 325 432 8 67 1 3 3359 1 534 1283 920 885 740 786 685 790 803 797 807 740 797 748 787 708 728 761 762 789 767 807 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 -0.00 0.02 -0.03 0.01 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 -0.02 0.03 -0.02 0.01 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.01 -0.01 0.03 -0.02 0.03 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.03 0.02 -0.00 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5851

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5762

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 714

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 204

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 56

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000489.1 MAX ENCSR521IID liver Homo sapiens MA0058.4
BP000490.1 MAX ENCSR847DIT liver Homo sapiens MA0058.4
Showing 2 profiles of page 3 from 3 pages