Summary information of deep learning profile DL0001.1

This page shows the summary of all deep learning-derived profiles and motifs for CTCF. Please scroll down the page to browse individual datasets.

Profile summary

Name: CTCF
Profile ID: DL0001.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1929.2 MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCODE
Number of datasets: 448
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.06 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.08 0.15 0.00 0.05 0.02 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.08 0.00 0.03 0.01 0.00 0.00 ]
G [ 0.00 -0.00 0.01 0.02 -0.00 -0.00 0.01 0.01 -0.00 0.00 0.16 0.07 0.05 0.14 0.09 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 ]
No common motifs identified for DL0001.1.

448 models found for CTCF

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000171.1 CTCF ENCSR194JAU middle frontal area 46 Homo sapiens MA0139.2
BP000172.1 CTCF ENCSR194WQV nephron Homo sapiens MA0139.2
BP000173.1 CTCF ENCSR195POA lower lobe of left lung Homo sapiens MA0139.2
BP000174.1 CTCF ENCSR196HOM epithelial cell of prostate Homo sapiens MA0139.2
BP000175.1 CTCF ENCSR203QEB Panc1 Homo sapiens MA0139.2
BP000176.1 CTCF ENCSR206ETG gastroesophageal sphincter Homo sapiens MA0139.2
BP000177.1 CTCF ENCSR211AFA middle frontal area 46 Homo sapiens MA0139.2
BP000178.1 CTCF ENCSR216SIK HCT116 Homo sapiens MA0139.2
BP000179.1 CTCF ENCSR218MVT neural crest cell Homo sapiens MA0139.2
BP000180.1 CTCF ENCSR222SQE sigmoid colon Homo sapiens MA0139.2
Showing 10 profiles of page 18 from 45 pages