Detailed information of deep learning profile BP001347.1

This page shows detailed deep learning-derived predictions and motifs for ZNF549 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF549
Model ID: BP001347.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1728.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q6P9A3  
Source: ENCSR545ACM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.01 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 -0.00 0.01 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 12 23 16 16 13 13 19 25 15 9 13 13 12 10 25 13 12 12 11 13 10 19 13 20 17 15 0 1 9 0 2 12 1 37 14 3 7 15 31 8 22 51 28 28 16 15 15 13 25 20 ]
C [ 17 28 14 26 27 20 21 13 30 33 21 35 14 32 13 20 26 20 24 28 27 11 21 13 9 3 3 71 1 5 63 56 63 1 2 6 8 38 31 5 4 9 24 13 13 9 22 21 25 24 ]
G [ 18 6 18 17 10 25 12 22 11 15 17 13 15 11 13 20 24 20 13 9 8 19 29 23 37 9 70 1 5 67 5 3 1 16 52 4 14 17 4 3 42 7 11 9 24 40 14 16 15 9 ]
T [ 26 16 25 14 23 15 21 13 17 16 22 12 32 20 22 20 11 21 25 23 28 24 10 17 10 46 0 0 58 1 3 2 8 19 5 60 44 3 7 57 5 6 10 23 20 9 22 23 8 20 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.01 -0.01 -0.00 -0.01 0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.01 -0.00 -0.00 0.01 0.00 0.01 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 -0.01 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.01 -0.00 0.01 -0.01 -0.00 -0.01 -0.00 -0.00 -0.00 0.01 0.00 -0.01 -0.00 0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 881

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 357

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 116

1 profiles found for the same TF (ZNF549) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001346.1 ZNF549 ENCSR185QFX HEK293 Homo sapiens MA1728.2
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