Detailed information of deep learning profile BP001290.1

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This page shows detailed deep learning-derived predictions and motifs for ZFP1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZFP1
Model ID: BP001290.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0151.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q6P2D0  
Source: ENCSR586DEH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.06 -0.00 0.06 0.00 -0.00 -0.00 0.06 0.00 -0.00 -0.00 0.02 0.04 0.03 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.06 0.13 0.07 -0.00 -0.00 0.10 0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.05 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.09 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 0.06 0.05 0.04 0.03 -0.00 0.10 0.00 -0.01 -0.00 0.00 -0.00 -0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 0.05 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 439 224 159 198 148 147 480 436 129 149 250 486 147 573 461 27 100 44 74 737 5 726 68 1 12 781 57 26 214 578 681 606 160 58 552 131 62 268 234 120 147 457 348 349 364 370 172 275 470 414 ]
C [ 140 232 147 104 194 381 135 118 408 384 190 97 124 96 157 21 26 274 87 18 23 38 657 853 732 5 16 781 239 166 33 45 490 25 16 82 628 360 166 178 389 112 141 105 132 125 168 110 107 101 ]
G [ 137 98 107 231 122 140 106 165 114 105 95 131 403 91 65 24 27 35 57 86 14 13 39 1 1 9 768 6 29 102 28 137 83 38 221 139 85 32 69 79 94 126 154 232 132 214 126 301 148 224 ]
T [ 143 305 446 326 395 191 138 140 208 221 324 145 185 99 176 787 706 506 641 18 817 82 95 4 114 64 18 46 377 13 117 71 126 738 70 507 84 199 390 482 229 164 216 173 231 150 393 173 134 120 ]

Hypothetical CWM

   
A [ -0.00 -0.01 0.02 -0.00 -0.02 0.01 -0.02 0.00 0.07 -0.04 0.07 0.04 -0.03 -0.03 0.06 0.04 -0.02 0.00 0.04 0.05 0.05 0.01 0.01 0.04 0.00 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.02 0.02 0.00 0.02 -0.01 -0.02 0.02 -0.00 -0.03 0.04 0.03 0.08 0.13 0.09 -0.02 -0.03 0.11 0.03 0.04 -0.03 0.00 0.05 -0.02 -0.02 -0.00 0.06 0.03 0.01 0.02 0.01 ]
G [ 0.02 0.01 0.01 0.01 0.01 -0.02 0.00 0.04 0.05 -0.00 -0.04 0.02 0.04 0.02 0.00 0.10 0.02 -0.00 0.03 -0.01 0.02 0.01 0.01 0.03 0.02 0.00 0.01 0.01 0.01 0.01 ]
T [ 0.00 0.00 -0.00 0.02 0.07 0.06 0.07 0.04 -0.04 0.11 0.02 -0.02 0.01 0.06 0.03 -0.02 0.03 0.06 -0.02 0.02 -0.02 -0.00 0.06 -0.02 0.02 -0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2361

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1714

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1447

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 693

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 94

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZFP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001291.1 ZFP1 ENCSR617POJ K562 Homo sapiens UN0151.2
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