Detailed information of deep learning profile BP001290.1

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This page shows detailed deep learning-derived predictions and motifs for ZFP1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZFP1
Model ID: BP001290.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0151.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q6P2D0  
Source: ENCSR586DEH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.05 -0.00 -0.00 0.00 -0.00 0.02 0.00 -0.00 -0.00 0.00 -0.00 -0.01 0.00 0.10 -0.00 0.03 0.04 0.05 0.06 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.09 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.05 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 0.10 -0.00 -0.00 0.07 0.13 0.06 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.03 0.04 0.02 -0.00 -0.00 0.00 0.06 -0.00 -0.00 0.00 0.06 -0.00 0.06 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 120 134 173 393 150 231 173 216 164 229 482 390 199 84 507 70 738 126 71 117 13 377 46 18 64 114 4 95 82 817 18 641 506 706 787 176 99 185 145 324 221 208 140 138 191 395 326 446 305 143 ]
C [ 224 148 301 126 214 132 232 154 126 94 79 69 32 85 139 221 38 83 137 28 102 29 6 768 9 1 1 39 13 14 86 57 35 27 24 65 91 403 131 95 105 114 165 106 140 122 231 107 98 137 ]
G [ 101 107 110 168 125 132 105 141 112 389 178 166 360 628 82 16 25 490 45 33 166 239 781 16 5 732 853 657 38 23 18 87 274 26 21 157 96 124 97 190 384 408 118 135 381 194 104 147 232 140 ]
T [ 414 470 275 172 370 364 349 348 457 147 120 234 268 62 131 552 58 160 606 681 578 214 26 57 781 12 1 68 726 5 737 74 44 100 27 461 573 147 486 250 149 129 436 480 147 148 198 159 224 439 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 -0.01 0.02 -0.02 0.06 -0.00 -0.02 0.02 -0.02 0.06 0.03 -0.02 0.03 0.06 0.01 -0.02 0.02 0.11 -0.04 0.04 0.07 0.06 0.07 0.02 -0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 0.01 0.00 0.02 0.03 0.01 0.01 0.02 -0.01 0.03 -0.00 0.02 0.10 0.00 0.02 0.04 0.02 -0.04 -0.00 0.05 0.04 0.00 -0.02 0.01 0.01 0.01 0.01 0.02 ]
G [ 0.01 0.02 0.01 0.03 0.06 -0.00 -0.02 -0.02 0.05 0.00 -0.03 0.04 0.03 0.11 -0.03 -0.02 0.09 0.13 0.08 0.03 0.04 -0.03 -0.00 0.02 -0.02 -0.01 0.02 0.00 0.02 0.02 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.00 0.04 0.01 0.01 0.05 0.05 0.04 0.00 -0.02 0.04 0.06 -0.03 -0.03 0.04 0.07 -0.04 0.07 0.00 -0.02 0.01 -0.02 -0.00 0.02 -0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2361

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1714

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1447

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 693

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 94

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZFP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001291.1 ZFP1 ENCSR617POJ K562 Homo sapiens UN0151.2
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