Detailed information of deep learning profile BP001288.1

  1. Home
  2. Deep Learning Profile > BP001288.1
This page shows detailed deep learning-derived predictions and motifs for HSF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HSF1
Model ID: BP001288.1
Cell line/tissue: HepG2
Class: Heat shock factors
Family: HSF factors
JASPAR ID: MA0486.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10961  
Source: ENCSR000EET
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.02 0.00 0.05 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.05 0.01 0.00 0.00 0.00 ]
G [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.07 -0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.02 0.03 0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.03 0.04 -0.00 0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 119 113 144 136 119 129 143 134 126 115 124 143 105 153 170 103 84 56 41 19 8 320 0 498 489 125 127 47 36 15 35 196 73 128 127 118 117 110 133 120 135 126 123 122 113 121 127 114 134 114 ]
C [ 178 176 169 186 183 171 162 167 169 187 173 170 170 181 140 182 215 78 42 544 160 26 0 46 22 190 145 48 25 548 236 122 150 149 160 171 156 178 166 171 146 168 167 170 172 173 155 187 163 166 ]
G [ 147 155 159 138 149 140 155 148 163 149 157 161 194 125 140 174 144 53 61 20 26 236 580 12 34 147 160 29 26 7 59 163 201 213 167 183 168 160 164 154 166 167 158 164 164 148 168 160 152 159 ]
T [ 139 139 111 123 132 143 123 134 125 132 129 109 114 124 133 124 140 396 439 0 389 1 3 27 38 121 151 459 496 13 253 102 159 93 129 111 142 135 120 138 136 122 135 127 134 141 133 122 134 144 ]

Hypothetical CWM

   
A [ -0.01 -0.00 -0.00 -0.00 -0.02 0.01 0.01 -0.01 -0.01 -0.02 -0.01 0.00 -0.06 0.03 -0.06 0.06 0.05 -0.02 -0.01 -0.01 -0.01 -0.01 -0.04 0.01 -0.03 0.00 -0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.00 0.01 -0.00 -0.00 -0.00 0.01 0.00 -0.01 -0.03 0.05 0.02 0.00 -0.02 -0.01 -0.02 0.02 -0.00 -0.01 -0.03 0.05 0.01 0.00 0.01 0.00 0.00 0.01 0.01 ]
G [ 0.00 0.00 0.01 0.01 0.02 -0.01 -0.00 0.01 0.02 -0.01 0.00 0.00 -0.00 0.02 0.07 -0.04 -0.01 -0.00 0.02 -0.02 -0.01 -0.02 0.01 0.01 0.02 0.01 0.00 0.01 0.01 ]
T [ -0.01 -0.01 -0.01 -0.02 -0.01 -0.01 -0.01 -0.01 -0.01 0.03 0.04 -0.07 0.03 -0.07 -0.00 -0.01 -0.02 -0.01 -0.01 0.04 0.04 -0.04 0.00 -0.02 -0.00 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 570

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 104

CWM

PFM

     

HCWM

1 profiles found for the same TF (HSF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001289.1 HSF1 ENCSR062HDL MCF-7 Homo sapiens MA0486.2
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)