Detailed information of deep learning profile BP001288.1

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This page shows detailed deep learning-derived predictions and motifs for HSF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HSF1
Model ID: BP001288.1
Cell line/tissue: HepG2
Class: Heat shock factors
Family: HSF factors
JASPAR ID: MA0486.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10961  
Source: ENCSR000EET
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 0.00 -0.00 0.04 0.03 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.03 0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.07 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.01 0.05 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 0.05 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.04 0.05 0.00 0.02 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 144 134 122 133 141 134 127 135 122 136 138 120 135 142 111 129 93 159 102 253 13 496 459 151 121 38 27 3 1 389 0 439 396 140 124 133 124 114 109 129 132 125 134 123 143 132 123 111 139 139 ]
C [ 159 152 160 168 148 164 164 158 167 166 154 164 160 168 183 167 213 201 163 59 7 26 29 160 147 34 12 580 236 26 20 61 53 144 174 140 125 194 161 157 149 163 148 155 140 149 138 159 155 147 ]
G [ 166 163 187 155 173 172 170 167 168 146 171 166 178 156 171 160 149 150 122 236 548 25 48 145 190 22 46 0 26 160 544 42 78 215 182 140 181 170 170 173 187 169 167 162 171 183 186 169 176 178 ]
T [ 114 134 114 127 121 113 122 123 126 135 120 133 110 117 118 127 128 73 196 35 15 36 47 127 125 489 498 0 320 8 19 41 56 84 103 170 153 105 143 124 115 126 134 143 129 119 136 144 113 119 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.00 -0.02 0.00 -0.04 0.04 0.04 -0.01 -0.01 -0.02 -0.01 -0.00 -0.07 0.03 -0.07 0.04 0.03 -0.01 -0.01 -0.01 -0.01 -0.01 -0.02 -0.01 -0.01 -0.01 ]
C [ 0.01 0.01 0.00 0.01 0.02 0.01 0.01 -0.02 -0.01 -0.02 0.02 -0.00 -0.01 -0.04 0.07 0.02 -0.00 0.00 0.00 -0.01 0.02 0.01 -0.00 -0.01 0.02 0.01 0.01 0.00 0.00 ]
G [ 0.01 0.01 0.00 0.00 0.01 0.00 0.01 0.05 -0.03 -0.01 -0.00 0.02 -0.02 -0.01 -0.02 0.00 0.02 0.05 -0.03 -0.01 0.00 0.01 -0.00 -0.00 -0.00 0.01 0.00 0.01 0.01 ]
T [ -0.01 -0.01 -0.00 0.00 -0.03 0.01 -0.04 -0.01 -0.01 -0.01 -0.01 -0.02 0.05 0.06 -0.06 0.03 -0.06 0.00 -0.01 -0.02 -0.01 -0.01 0.01 0.01 -0.02 -0.00 -0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 570

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 104

CWM

PFM

     

HCWM

1 profiles found for the same TF (HSF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001289.1 HSF1 ENCSR062HDL MCF-7 Homo sapiens MA0486.2
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