Detailed information of deep learning profile BP001281.1

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This page shows detailed deep learning-derived predictions and motifs for ZKSCAN8 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZKSCAN8
Model ID: BP001281.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0592.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15776  
Source: ENCSR755CRA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.03 0.00 0.02 -0.00 0.02 0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.02 0.02 -0.00 0.01 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 0.00 0.00 -0.00 0.01 -0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.02 0.03 -0.00 0.04 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 0.02 -0.00 0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.03 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 85 102 123 111 93 156 92 154 122 122 80 52 62 89 81 31 28 399 33 363 3 403 35 28 301 57 21 28 67 10 38 41 334 333 20 297 277 244 28 52 56 100 60 128 88 89 121 113 153 97 ]
C [ 154 131 99 121 173 121 173 98 79 90 70 214 227 116 36 14 220 16 131 12 410 22 17 153 56 5 5 187 4 389 109 252 63 35 21 51 72 40 51 52 252 82 121 79 124 105 107 124 111 80 ]
G [ 96 89 103 150 96 79 89 94 193 128 204 106 74 89 190 389 13 18 16 44 4 7 373 25 26 374 402 6 375 12 11 37 34 47 20 70 44 91 37 316 38 55 106 186 73 82 129 124 92 116 ]
T [ 111 124 121 64 84 90 92 100 52 106 92 74 83 152 139 12 185 13 266 27 29 14 21 240 63 10 18 225 0 35 288 116 15 31 385 28 53 71 330 26 100 209 159 53 161 170 89 85 90 153 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 -0.01 -0.02 0.03 0.00 0.03 -0.01 0.02 0.00 -0.01 0.01 -0.00 -0.01 -0.01 0.00 -0.01 0.00 -0.00 0.02 0.02 -0.01 0.01 0.01 0.00 -0.01 0.00 -0.00 0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 -0.00 -0.01 0.01 -0.02 -0.01 -0.02 0.04 -0.01 -0.02 0.02 0.00 0.00 -0.01 0.04 -0.03 0.03 0.00 0.00 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 0.01 -0.00 0.00 -0.00 ]
G [ 0.00 -0.00 0.00 -0.00 0.02 -0.02 -0.00 -0.01 0.01 -0.02 -0.01 0.02 -0.02 -0.01 0.02 0.03 -0.03 0.05 -0.01 0.00 -0.00 0.00 -0.01 -0.01 0.01 -0.01 -0.00 -0.01 0.02 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.02 -0.01 0.02 -0.01 -0.00 -0.00 0.00 0.02 0.01 -0.02 -0.01 0.01 -0.02 0.00 0.00 0.01 -0.01 0.00 0.03 -0.00 0.00 0.00 0.01 -0.01 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 745

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 619

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 459

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZKSCAN8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001279.1 ZKSCAN8 ENCSR115QIT WTC11 Homo sapiens UN0592.2
BP001280.1 ZKSCAN8 ENCSR448UKK K562 Homo sapiens UN0592.2
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