Detailed information of deep learning profile BP001280.1

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This page shows detailed deep learning-derived predictions and motifs for ZKSCAN8 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZKSCAN8
Model ID: BP001280.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0592.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15776  
Source: ENCSR448UKK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 0.01 0.00 -0.00 0.01 0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.02 -0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.04 0.03 -0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.01 0.00 0.02 -0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.06 -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 ]
T [ -0.00 0.00 0.01 0.01 -0.00 0.01 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.03 0.00 0.02 0.00 0.05 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 857 627 644 603 967 854 465 944 1072 818 335 1461 577 511 428 1698 431 262 735 1473 376 184 1106 205 79 562 1412 171 84 52 175 1438 74 1427 81 979 843 649 590 515 814 417 605 640 580 615 577 693 815 708 ]
C [ 590 518 586 830 573 483 939 616 414 379 1403 464 537 369 349 273 374 271 222 143 197 1561 135 2155 2014 165 198 2049 40 12 307 80 41 61 2343 905 527 404 556 982 631 1020 533 529 527 547 794 620 481 509 ]
G [ 515 609 579 532 498 689 490 500 535 992 323 326 289 379 392 332 324 368 1192 605 1761 196 1150 93 26 259 657 163 104 2508 85 550 25 1003 55 193 576 984 988 478 527 471 518 840 600 772 573 527 675 805 ]
T [ 643 851 796 640 567 579 711 545 584 416 544 354 1202 1346 1436 302 1476 1704 456 384 271 664 214 152 486 1619 338 222 2377 33 2038 537 2465 114 126 528 659 568 471 630 633 697 949 596 898 671 661 765 634 583 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.00 -0.01 0.01 0.01 0.00 0.00 0.03 0.01 -0.00 0.02 0.01 0.01 -0.01 0.01 0.01 -0.02 0.02 0.02 0.00 -0.02 -0.01 -0.01 0.03 -0.01 0.04 -0.01 0.01 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.01 0.04 -0.01 0.04 0.04 -0.01 -0.00 0.03 -0.01 -0.02 0.01 -0.01 0.00 -0.02 0.05 0.00 0.01 0.00 0.01 ]
G [ 0.00 0.01 0.00 0.01 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.03 -0.01 0.04 -0.01 -0.01 0.01 0.01 -0.00 0.01 0.06 -0.01 -0.01 -0.03 0.02 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 0.01 0.01 0.01 -0.01 0.02 0.02 0.00 0.01 -0.00 0.01 -0.01 -0.01 0.02 0.02 0.00 0.01 0.04 -0.01 0.03 0.02 0.05 -0.02 -0.00 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3782

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 803

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 94

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 49

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZKSCAN8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001279.1 ZKSCAN8 ENCSR115QIT WTC11 Homo sapiens UN0592.2
BP001281.1 ZKSCAN8 ENCSR755CRA K562 Homo sapiens UN0592.2
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