Detailed information of deep learning profile BP001281.1

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This page shows detailed deep learning-derived predictions and motifs for ZKSCAN8 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZKSCAN8
Model ID: BP001281.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0592.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15776  
Source: ENCSR755CRA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 0.00 -0.00 0.02 -0.00 0.01 -0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 0.03 0.02 -0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 0.01 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 -0.00 0.02 0.02 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.02 -0.00 0.02 0.00 0.03 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 153 90 85 89 170 161 53 159 209 100 26 330 71 53 28 385 31 15 116 288 35 0 225 18 10 63 240 21 14 29 27 266 13 185 12 139 152 83 74 92 106 52 100 92 90 84 64 121 124 111 ]
C [ 116 92 124 129 82 73 186 106 55 38 316 37 91 44 70 20 47 34 37 11 12 375 6 402 374 26 25 373 7 4 44 16 18 13 389 190 89 74 106 204 128 193 94 89 79 96 150 103 89 96 ]
G [ 80 111 124 107 105 124 79 121 82 252 52 51 40 72 51 21 35 63 252 109 389 4 187 5 5 56 153 17 22 410 12 131 16 220 14 36 116 227 214 70 90 79 98 173 121 173 121 99 131 154 ]
T [ 97 153 113 121 89 88 128 60 100 56 52 28 244 277 297 20 333 334 41 38 10 67 28 21 57 301 28 35 403 3 363 33 399 28 31 81 89 62 52 80 122 122 154 92 156 93 111 123 102 85 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.00 -0.01 0.01 0.00 0.00 -0.00 0.03 0.00 -0.01 0.01 0.00 0.00 -0.02 0.01 -0.01 -0.02 0.01 0.02 0.00 -0.00 -0.00 -0.01 0.02 -0.01 0.02 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.02 -0.01 -0.00 -0.01 0.01 -0.01 -0.01 0.00 -0.00 0.00 -0.01 0.05 -0.03 0.03 0.02 -0.01 -0.02 0.02 -0.01 -0.02 0.01 -0.01 -0.00 -0.02 0.02 -0.00 0.00 -0.00 0.00 ]
G [ -0.00 0.00 -0.00 0.01 -0.01 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.01 0.00 0.00 0.03 -0.03 0.04 -0.01 0.00 0.00 0.02 -0.02 -0.01 0.04 -0.02 -0.01 -0.02 0.01 -0.01 -0.00 0.00 0.00 -0.00 ]
T [ 0.00 -0.00 0.00 -0.00 0.00 -0.01 0.00 0.01 0.01 -0.01 0.02 0.02 -0.00 0.00 -0.01 0.00 -0.01 -0.01 -0.00 0.01 -0.01 0.00 0.02 -0.01 0.03 0.00 0.03 -0.02 -0.01 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 745

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 619

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 459

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZKSCAN8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001279.1 ZKSCAN8 ENCSR115QIT WTC11 Homo sapiens UN0592.2
BP001280.1 ZKSCAN8 ENCSR448UKK K562 Homo sapiens UN0592.2
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