Detailed information of deep learning profile BP001273.1

This page shows detailed deep learning-derived predictions and motifs for SP4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP4
Model ID: BP001273.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0685.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02446  
Source: ENCSR642PQK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.01 0.02 0.00 0.02 0.02 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 1432 1366 1334 1395 1358 1395 1329 1353 1250 1227 1274 1236 1307 1243 1180 1155 1087 1155 984 927 918 954 2518 2012 934 399 487 1050 1 340 0 0 2 1583 578 1131 1143 1094 967 870 989 1077 1189 1187 1170 1239 1271 1235 1303 1240 ]
C [ 3508 3510 3473 3472 3448 3486 3457 3483 3529 3563 3693 3684 3412 3706 3826 3926 3877 3876 3947 4222 4265 4001 2945 1663 363 6762 6713 7896 8966 11 8974 8974 7497 6150 4962 2873 3531 4262 3866 3939 3479 3753 3822 3812 3787 3632 3692 3674 3731 3654 ]
G [ 2732 2771 2789 2754 2852 2745 2801 2791 2861 2838 2656 2731 2804 2655 2549 2511 2585 2665 2973 2496 2422 2503 1623 4555 7009 828 90 36 4 8210 7 8 9 260 1390 1973 2744 2517 2831 2944 3170 2773 2652 2630 2598 2643 2545 2612 2508 2720 ]
T [ 1311 1336 1387 1362 1325 1357 1396 1356 1343 1355 1359 1332 1460 1379 1428 1391 1434 1287 1079 1338 1378 1525 1897 753 677 994 1693 1 12 422 2 1 1475 990 2053 3006 1565 1110 1319 1230 1345 1380 1320 1354 1428 1469 1475 1462 1441 1369 ]

Hypothetical CWM

A [ -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.01 -0.00 -0.01 -0.01 -0.01 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.01 0.02 -0.01 0.02 0.02 0.01 0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 0.00 0.01 -0.00 -0.01 -0.00 -0.01 0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.01 -0.01 -0.00 -0.01 -0.01 0.00 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2322

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 663

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 296

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 208

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 206

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 127

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 64

1 profiles found for the same TF (SP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001272.1 SP4 ENCSR000BQV H1 Homo sapiens MA0685.2
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