Detailed information of deep learning profile BP001272.1

This page shows detailed deep learning-derived predictions and motifs for SP4 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP4
Model ID: BP001272.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0685.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02446  
Source: ENCSR000BQV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.00 0.00 0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 680 633 651 645 637 681 675 650 688 706 599 645 544 669 1251 1057 636 306 430 402 9 29 18 63 275 610 374 638 748 685 661 540 585 718 769 766 705 696 701 644 699 713 740 703 763 715 704 661 696 658 ]
C [ 1377 1447 1532 1547 1462 1385 1510 1513 1514 1471 1580 1396 1515 1498 1188 590 393 2565 2423 2973 3942 59 3771 3676 3064 2563 2348 864 1150 1578 1543 1275 1132 1456 1518 1377 1495 1360 1439 1480 1558 1401 1386 1426 1353 1429 1387 1326 1426 1418 ]
G [ 1196 1184 1105 1138 1155 1129 1058 1035 1019 979 1130 1073 905 876 611 1874 2633 416 399 550 17 3778 160 161 215 254 378 596 1236 1131 913 1602 1611 1032 1032 1158 1091 1151 1083 1133 1033 1211 1200 1113 1093 1107 1127 1291 1173 1154 ]
T [ 725 714 690 648 724 783 735 780 757 822 669 864 1014 935 928 457 316 691 726 53 10 112 29 78 424 551 878 1880 844 584 861 561 650 772 659 677 687 771 755 721 688 653 652 736 769 727 760 700 683 748 ]

Hypothetical CWM

A [ -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.01 -0.00 0.01 0.01 0.00 0.00 0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 375

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 116

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 43

1 profiles found for the same TF (SP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001273.1 SP4 ENCSR642PQK HepG2 Homo sapiens MA0685.2
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