Detailed information of deep learning profile BP001272.1

This page shows detailed deep learning-derived predictions and motifs for SP4 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP4
Model ID: BP001272.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0685.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02446  
Source: ENCSR000BQV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 748 683 700 760 727 769 736 652 653 688 721 755 771 687 677 659 772 650 561 861 584 844 1880 878 551 424 78 29 112 10 53 726 691 316 457 928 935 1014 864 669 822 757 780 735 783 724 648 690 714 725 ]
C [ 1154 1173 1291 1127 1107 1093 1113 1200 1211 1033 1133 1083 1151 1091 1158 1032 1032 1611 1602 913 1131 1236 596 378 254 215 161 160 3778 17 550 399 416 2633 1874 611 876 905 1073 1130 979 1019 1035 1058 1129 1155 1138 1105 1184 1196 ]
G [ 1418 1426 1326 1387 1429 1353 1426 1386 1401 1558 1480 1439 1360 1495 1377 1518 1456 1132 1275 1543 1578 1150 864 2348 2563 3064 3676 3771 59 3942 2973 2423 2565 393 590 1188 1498 1515 1396 1580 1471 1514 1513 1510 1385 1462 1547 1532 1447 1377 ]
T [ 658 696 661 704 715 763 703 740 713 699 644 701 696 705 766 769 718 585 540 661 685 748 638 374 610 275 63 18 29 9 402 430 306 636 1057 1251 669 544 645 599 706 688 650 675 681 637 645 651 633 680 ]

Hypothetical CWM

A [ -0.00 0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 0.00 0.00 0.00 0.01 0.01 -0.00 0.01 0.01 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 375

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 116

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 43

1 profiles found for the same TF (SP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001273.1 SP4 ENCSR642PQK HepG2 Homo sapiens MA0685.2
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