Detailed information of deep learning profile BP001266.1

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This page shows detailed deep learning-derived predictions and motifs for MEF2D in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2D
Model ID: BP001266.1
Cell line/tissue: K562
Class: MADS box factors
Family: Regulators of differentiation
JASPAR ID: MA0773.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q05BX2  
Source: ENCSR647ZXA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.03 0.02 0.03 0.02 0.04 -0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.03 0.01 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.00 0.05 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1168 1210 1241 1153 1197 1192 1241 1217 1268 1247 1252 1247 1333 1241 1216 1309 1294 1328 1237 1266 724 517 39 3224 3023 3691 3599 3857 90 4141 630 1587 1610 1170 1072 1214 1024 1111 1279 1085 1154 1191 1148 1236 1138 1175 1150 1280 1228 1146 ]
C [ 995 953 968 1036 986 958 941 955 971 979 937 1021 1044 973 1067 1050 1055 843 719 491 482 3170 1440 437 79 12 80 8 23 11 152 1845 1158 1302 1293 946 993 1039 936 1005 1026 948 1030 1010 978 1078 1076 975 923 1063 ]
G [ 986 930 914 929 997 1045 1046 1022 978 904 904 913 897 976 992 922 917 1069 1285 1140 1595 174 18 138 358 306 125 21 12 160 3377 365 357 644 698 986 1144 1054 1005 1019 1009 932 1034 974 1064 999 980 966 1090 1045 ]
T [ 1175 1231 1201 1206 1144 1129 1096 1130 1107 1194 1231 1143 1050 1134 1049 1043 1058 1084 1083 1427 1523 463 2827 525 864 315 520 438 4199 12 165 527 1199 1208 1261 1178 1163 1120 1104 1215 1135 1253 1112 1104 1144 1072 1118 1103 1083 1070 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 -0.00 -0.01 -0.04 0.03 0.02 0.03 0.02 0.04 -0.00 0.05 0.00 0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 -0.00 -0.01 0.03 0.02 -0.02 -0.04 -0.04 -0.02 -0.03 -0.03 -0.02 -0.01 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.01 -0.02 -0.02 -0.01 -0.01 -0.03 -0.04 -0.04 0.00 0.04 -0.01 -0.00 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 0.01 -0.00 0.04 -0.00 0.02 0.00 0.01 0.01 0.05 -0.04 -0.01 -0.01 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5217

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2526

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1775

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 29

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 22

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEF2D) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001267.1 MEF2D ENCSR923MOO HepG2 Homo sapiens MA0773.1
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