Detailed information of deep learning profile BP001267.1

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This page shows detailed deep learning-derived predictions and motifs for MEF2D in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2D
Model ID: BP001267.1
Cell line/tissue: HepG2
Class: MADS box factors
Family: Regulators of differentiation
JASPAR ID: MA0773.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q05BX2  
Source: ENCSR923MOO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.03 0.02 0.03 0.01 0.03 -0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.02 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 299 274 278 277 288 287 311 313 314 285 268 307 305 287 257 292 303 280 298 158 108 18 921 739 951 876 961 32 1012 137 390 380 273 290 305 265 255 309 256 278 289 292 310 281 261 271 287 268 295 279 ]
C [ 211 224 256 260 254 235 236 257 217 252 238 242 239 241 282 301 201 176 98 87 770 221 39 25 6 15 0 5 1 17 465 303 389 304 194 209 264 203 234 256 263 234 207 217 257 255 267 231 232 228 ]
G [ 247 256 230 244 234 269 248 216 246 216 238 224 221 249 213 201 273 333 288 398 37 2 14 35 20 17 3 2 18 860 75 52 145 170 289 307 290 232 274 247 206 220 251 238 255 264 226 271 273 266 ]
T [ 280 283 273 256 261 246 242 251 260 284 293 264 272 260 285 243 260 248 353 394 122 796 63 238 60 129 73 998 6 23 107 302 230 273 249 256 228 293 273 256 279 291 269 301 264 247 257 267 237 264 ]

Hypothetical CWM

   
A [ -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.01 -0.01 -0.02 0.04 0.03 0.03 0.01 0.04 -0.01 0.04 0.01 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.00 -0.00 0.03 0.02 -0.01 -0.01 -0.00 0.01 -0.03 -0.01 -0.02 -0.01 0.02 0.02 0.02 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.02 0.02 0.02 0.00 -0.02 -0.01 -0.02 -0.01 -0.01 -0.01 -0.02 0.00 0.04 -0.00 -0.00 0.00 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 0.03 -0.01 0.01 -0.00 0.01 0.01 0.04 -0.02 -0.01 -0.01 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4649

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4015

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1007

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 749

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 725

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 653

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 436

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 295

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 21

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEF2D) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001266.1 MEF2D ENCSR647ZXA K562 Homo sapiens MA0773.1
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