Detailed information of deep learning profile BP001266.1

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This page shows detailed deep learning-derived predictions and motifs for MEF2D in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2D
Model ID: BP001266.1
Cell line/tissue: K562
Class: MADS box factors
Family: Regulators of differentiation
JASPAR ID: MA0773.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q05BX2  
Source: ENCSR647ZXA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 0.03 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.00 0.05 -0.00 0.04 0.02 0.03 0.02 0.03 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1070 1083 1103 1118 1072 1144 1104 1112 1253 1135 1215 1104 1120 1163 1178 1261 1208 1199 527 165 12 4199 438 520 315 864 525 2827 463 1523 1427 1083 1084 1058 1043 1049 1134 1050 1143 1231 1194 1107 1130 1096 1129 1144 1206 1201 1231 1175 ]
C [ 1045 1090 966 980 999 1064 974 1034 932 1009 1019 1005 1054 1144 986 698 644 357 365 3377 160 12 21 125 306 358 138 18 174 1595 1140 1285 1069 917 922 992 976 897 913 904 904 978 1022 1046 1045 997 929 914 930 986 ]
G [ 1063 923 975 1076 1078 978 1010 1030 948 1026 1005 936 1039 993 946 1293 1302 1158 1845 152 11 23 8 80 12 79 437 1440 3170 482 491 719 843 1055 1050 1067 973 1044 1021 937 979 971 955 941 958 986 1036 968 953 995 ]
T [ 1146 1228 1280 1150 1175 1138 1236 1148 1191 1154 1085 1279 1111 1024 1214 1072 1170 1610 1587 630 4141 90 3857 3599 3691 3023 3224 39 517 724 1266 1237 1328 1294 1309 1216 1241 1333 1247 1252 1247 1268 1217 1241 1192 1197 1153 1241 1210 1168 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 -0.01 -0.01 -0.04 0.05 0.01 0.01 0.00 0.02 -0.00 0.04 -0.00 0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 -0.00 -0.01 0.04 0.00 -0.04 -0.04 -0.03 -0.01 -0.01 -0.02 -0.02 -0.01 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.01 -0.02 -0.03 -0.03 -0.02 -0.04 -0.04 -0.02 0.02 0.03 -0.01 -0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 0.01 0.00 0.05 -0.00 0.04 0.02 0.03 0.02 0.03 -0.04 -0.01 -0.00 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5217

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2526

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1775

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 29

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 22

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEF2D) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001267.1 MEF2D ENCSR923MOO HepG2 Homo sapiens MA0773.1
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