Detailed information of deep learning profile BP001243.1

This page shows detailed deep learning-derived predictions and motifs for E4F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E4F1
Model ID: BP001243.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: UN0801.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q66K89  
Source: ENCSR731LHZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 -0.00 0.03 0.03 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.01 0.02 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.03 0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 2720 2994 2809 3045 2948 3203 3014 2868 2973 2900 2940 2980 2983 2692 2742 2654 2797 3123 3052 5347 6098 3564 891 5056 1 9 12583 12460 1542 1216 2356 2934 2419 2775 2519 2501 2686 2549 2785 2742 2773 2779 2640 2658 2900 2913 2703 2814 2866 2969 ]
C [ 3427 3252 3392 3364 3599 3399 3309 3446 3408 3217 3393 3433 3361 3661 3626 3775 4101 3613 3003 2125 1608 4063 8979 7427 1 12 10 16 619 2693 2377 3174 4247 3032 3377 3658 3163 3391 3542 3351 3526 3364 3303 3523 3356 3363 3609 3510 3296 3289 ]
G [ 3851 3804 3933 3787 3680 3527 3855 3846 3660 3874 3720 3697 3774 3701 3814 3818 3470 3608 4718 3156 2524 3144 2589 113 12602 12563 5 12 10398 967 6259 5116 3842 4018 4252 3796 3999 3911 3907 3736 3860 3940 3931 4003 3725 3813 3754 3705 3847 3815 ]
T [ 2606 2554 2470 2408 2377 2475 2426 2444 2563 2613 2551 2494 2486 2550 2422 2357 2236 2260 1831 1976 2374 1833 145 8 0 20 6 116 45 7728 1612 1380 2096 2779 2456 2649 2756 2753 2370 2775 2445 2521 2730 2420 2623 2515 2538 2575 2595 2531 ]

Hypothetical CWM

A [ 0.00 0.01 0.01 0.00 -0.00 0.01 -0.01 -0.01 0.03 0.03 0.01 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.01 0.00 0.02 0.03 -0.01 -0.02 -0.01 -0.01 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.01 0.04 0.03 -0.01 -0.02 0.02 -0.01 0.01 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 -0.02 -0.03 -0.02 -0.01 -0.01 -0.00 -0.02 0.01 -0.01 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3270

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3037

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1330

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 801

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 624

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 547

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 426

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 128

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 121

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 115

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 105

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 84

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 33

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 29

1 profiles found for the same TF (E4F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001242.1 E4F1 ENCSR439WAF GM12878 Homo sapiens UN0801.1
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