Detailed information of deep learning profile BP001242.1

This page shows detailed deep learning-derived predictions and motifs for E4F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E4F1
Model ID: BP001242.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: UN0801.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q66K89  
Source: ENCSR439WAF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.02 0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.02 0.01 0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.02 0.02 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 366 361 349 323 400 340 343 357 374 351 377 333 350 417 410 351 388 289 174 136 1360 5 8 12 12 1 1 20 207 361 235 207 303 356 302 326 299 348 339 351 350 315 337 327 337 321 320 311 346 350 ]
C [ 739 760 710 718 748 729 758 770 722 727 768 747 777 828 638 798 820 660 930 1274 106 1864 9 15 2046 2088 7 590 594 468 626 986 618 628 707 676 653 725 701 691 748 729 696 717 690 687 710 716 699 696 ]
G [ 603 591 628 637 508 658 653 576 606 626 582 680 586 561 700 620 473 739 551 392 469 42 4 21 10 0 1865 1378 822 223 413 478 783 735 756 692 709 625 654 661 614 640 640 647 637 679 651 666 638 662 ]
T [ 382 378 403 412 434 363 336 387 388 386 363 330 377 284 342 321 409 402 435 288 155 179 2069 2042 22 1 217 102 467 1038 816 419 386 371 325 396 429 392 396 387 378 406 417 399 426 403 409 397 407 382 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.01 0.01 -0.01 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.01 -0.01 -0.01 0.02 0.02 -0.01 0.01 0.00 0.00 -0.00 0.00 ]
G [ -0.00 0.00 0.00 -0.00 0.00 -0.01 -0.00 -0.00 -0.01 -0.01 0.02 0.01 0.00 -0.01 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.02 0.02 -0.01 -0.01 -0.00 -0.00 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1003

1 profiles found for the same TF (E4F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001243.1 E4F1 ENCSR731LHZ K562 Homo sapiens UN0801.1
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