Detailed information of deep learning profile BP001243.1

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This page shows detailed deep learning-derived predictions and motifs for E4F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E4F1
Model ID: BP001243.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: UN0801.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q66K89  
Source: ENCSR731LHZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.03 0.04 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.02 0.01 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.03 0.03 -0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 2531 2595 2575 2538 2515 2623 2420 2730 2521 2445 2775 2370 2753 2756 2649 2456 2779 2096 1380 1612 7728 45 116 6 20 0 8 145 1833 2374 1976 1831 2260 2236 2357 2422 2550 2486 2494 2551 2613 2563 2444 2426 2475 2377 2408 2470 2554 2606 ]
C [ 3815 3847 3705 3754 3813 3725 4003 3931 3940 3860 3736 3907 3911 3999 3796 4252 4018 3842 5116 6259 967 10398 12 5 12563 12602 113 2589 3144 2524 3156 4718 3608 3470 3818 3814 3701 3774 3697 3720 3874 3660 3846 3855 3527 3680 3787 3933 3804 3851 ]
G [ 3289 3296 3510 3609 3363 3356 3523 3303 3364 3526 3351 3542 3391 3163 3658 3377 3032 4247 3174 2377 2693 619 16 10 12 1 7427 8979 4063 1608 2125 3003 3613 4101 3775 3626 3661 3361 3433 3393 3217 3408 3446 3309 3399 3599 3364 3392 3252 3427 ]
T [ 2969 2866 2814 2703 2913 2900 2658 2640 2779 2773 2742 2785 2549 2686 2501 2519 2775 2419 2934 2356 1216 1542 12460 12583 9 1 5056 891 3564 6098 5347 3052 3123 2797 2654 2742 2692 2983 2980 2940 2900 2973 2868 3014 3203 2948 3045 2809 2994 2720 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.01 0.01 -0.02 -0.00 -0.01 -0.01 -0.02 -0.03 -0.02 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.01 0.02 -0.02 -0.01 0.03 0.04 -0.01 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 -0.01 -0.01 -0.02 -0.01 0.03 0.02 0.00 -0.01 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.01 0.03 0.03 -0.01 -0.01 0.01 -0.00 0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3270

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3037

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1330

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 624

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 547

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 426

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 115

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 84

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 29

CWM

PFM

     

HCWM

1 profiles found for the same TF (E4F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001242.1 E4F1 ENCSR439WAF GM12878 Homo sapiens UN0801.1
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