Detailed information of deep learning profile BP001242.1

This page shows detailed deep learning-derived predictions and motifs for E4F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E4F1
Model ID: BP001242.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: UN0801.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q66K89  
Source: ENCSR439WAF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.02 0.02 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.01 0.02 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.02 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 382 407 397 409 403 426 399 417 406 378 387 396 392 429 396 325 371 386 419 816 1038 467 102 217 1 22 2042 2069 179 155 288 435 402 409 321 342 284 377 330 363 386 388 387 336 363 434 412 403 378 382 ]
C [ 662 638 666 651 679 637 647 640 640 614 661 654 625 709 692 756 735 783 478 413 223 822 1378 1865 0 10 21 4 42 469 392 551 739 473 620 700 561 586 680 582 626 606 576 653 658 508 637 628 591 603 ]
G [ 696 699 716 710 687 690 717 696 729 748 691 701 725 653 676 707 628 618 986 626 468 594 590 7 2088 2046 15 9 1864 106 1274 930 660 820 798 638 828 777 747 768 727 722 770 758 729 748 718 710 760 739 ]
T [ 350 346 311 320 321 337 327 337 315 350 351 339 348 299 326 302 356 303 207 235 361 207 20 1 1 12 12 8 5 1360 136 174 289 388 351 410 417 350 333 377 351 374 357 343 340 400 323 349 361 366 ]

Hypothetical CWM

A [ 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.01 -0.01 0.02 0.02 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 -0.01 0.00 0.01 0.02 -0.01 -0.01 -0.00 -0.00 -0.01 0.00 -0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 0.00 0.00 0.01 -0.01 0.02 0.02 -0.01 -0.01 0.01 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.01 0.01 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1003

1 profiles found for the same TF (E4F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001243.1 E4F1 ENCSR731LHZ K562 Homo sapiens UN0801.1
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