Detailed information of deep learning profile BP001239.1

  1. Home
  2. Deep Learning Profile > BP001239.1
This page shows detailed deep learning-derived predictions and motifs for IRF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF2
Model ID: BP001239.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
JASPAR ID: MA0051.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14316  
Source: ENCSR376WCJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.03 0.00 -0.00 0.00 0.10 -0.00 0.02 0.00 -0.00 0.00 0.04 -0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.01 0.02 0.00 0.00 0.00 0.00 0.01 0.01 -0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 ]
T [ 0.01 0.01 0.01 0.01 -0.00 -0.00 0.10 0.09 0.08 0.00 -0.00 0.00 0.11 0.09 0.07 -0.00 -0.00 -0.00 0.02 0.02 ]

Frequency matrix

       
A [ 683 664 712 638 754 687 696 673 708 650 698 615 761 652 651 432 322 282 1706 15 1 0 2 0 1686 92 12 43 28 157 878 583 543 535 471 603 663 655 702 731 667 708 682 653 691 690 718 714 722 653 ]
C [ 706 777 748 761 713 779 791 777 703 773 683 845 681 751 619 669 755 972 151 1688 2 2 186 2779 63 1418 17 34 243 1823 567 897 459 520 697 810 734 774 738 710 681 678 720 653 724 677 739 699 695 699 ]
G [ 653 674 647 692 662 654 649 690 620 699 634 659 690 825 649 647 559 265 808 1168 0 0 8 0 833 802 3 1 31 298 629 637 351 391 437 607 686 701 607 634 634 686 661 685 643 646 661 677 612 655 ]
T [ 880 807 815 831 793 802 786 782 891 800 907 803 790 694 1003 1174 1286 1403 257 51 2919 2920 2726 143 340 610 2890 2844 2620 644 848 805 1569 1476 1317 902 839 792 875 847 940 850 859 931 864 909 804 832 893 915 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.04 -0.03 -0.04 -0.02 -0.04 -0.03 0.04 -0.03 -0.03 0.00 -0.03 -0.02 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.03 -0.01 0.06 -0.02 -0.04 0.01 0.10 -0.03 0.05 -0.03 -0.03 0.01 0.06 0.00 0.02 0.00 0.01 ]
G [ 0.01 0.01 0.01 -0.01 0.03 0.06 -0.04 -0.04 -0.05 -0.07 0.06 0.04 -0.05 -0.06 -0.04 -0.01 0.04 0.02 -0.00 -0.01 ]
T [ 0.01 0.01 0.02 0.02 -0.02 -0.02 0.10 0.09 0.08 0.02 -0.02 0.00 0.11 0.09 0.07 0.01 -0.00 0.00 0.03 0.02 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 443

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 155

CWM

PFM

     

HCWM

1 profiles found for the same TF (IRF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001240.1 IRF2 ENCSR645ZWR K562 Homo sapiens MA0051.2
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)