Detailed information of deep learning profile BP001240.1

This page shows detailed deep learning-derived predictions and motifs for IRF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF2
Model ID: BP001240.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
JASPAR ID: MA0051.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14316  
Source: ENCSR645ZWR
Model: BPNet
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Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 0.01 0.01 -0.00 -0.00 -0.00 0.01 0.02 0.02 -0.00 -0.00 -0.00 0.01 0.01 0.01 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.01 0.00 0.02 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 54 45 53 46 49 60 52 36 46 74 65 55 51 44 57 129 164 159 48 24 15 186 188 187 9 5 15 173 169 174 5 22 73 103 74 47 39 40 46 42 40 57 39 54 42 47 46 52 43 44 ]
C [ 47 50 45 53 54 38 44 48 54 26 40 39 53 55 24 13 7 11 39 69 11 1 1 2 50 65 1 4 1 6 68 56 44 33 49 39 66 47 36 55 56 51 61 42 48 43 39 45 52 40 ]
G [ 54 49 59 55 47 53 55 59 57 47 41 45 51 52 70 42 13 13 81 28 164 1 0 1 126 0 173 12 17 7 109 16 63 38 48 67 47 62 59 50 61 56 54 59 62 74 63 58 64 71 ]
T [ 35 46 33 36 40 39 39 47 33 43 44 51 35 39 39 6 6 7 22 69 0 2 1 0 5 120 1 1 3 3 8 96 10 16 19 37 38 41 49 43 33 26 36 35 38 26 42 35 31 35 ]

Hypothetical CWM

A [ -0.00 0.00 0.00 -0.00 -0.00 -0.01 0.00 0.01 0.01 -0.00 -0.01 -0.01 0.01 0.02 0.02 -0.01 -0.01 -0.00 0.01 0.01 0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.01 -0.00 -0.00 0.00 0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.01 -0.01 -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.01 -0.01 0.00 -0.01 0.02 -0.01 -0.01 -0.01 0.01 -0.01 0.02 -0.01 -0.01 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 0.00 -0.01 -0.01 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 -0.01 -0.00 0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 189

1 profiles found for the same TF (IRF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001239.1 IRF2 ENCSR376WCJ K562 Homo sapiens MA0051.2
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