Detailed information of deep learning profile BP001214.1

  1. Home
  2. Deep Learning Profile > BP001214.1
This page shows detailed deep learning-derived predictions and motifs for ZNF146 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF146
Model ID: BP001214.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0316.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15072  
Source: ENCSR957LTN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.06 0.04 0.00 0.10 0.00 0.00 0.11 0.00 0.00 0.00 ]
C [ 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 0.00 0.02 -0.00 0.07 ]
G [ 0.00 0.00 0.00 -0.00 0.09 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.09 0.00 0.01 0.10 0.00 0.03 -0.01 0.00 ]

Frequency matrix

       
A [ 18 17 22 12 27 22 11 23 10 37 17 43 33 44 20 46 37 39 35 14 17 15 13 28 3 49 2 52 4 49 5 50 3 49 4 25 47 2 2 7 52 48 0 52 1 0 53 0 6 2 ]
C [ 8 5 5 0 5 9 5 2 2 0 2 2 2 1 4 2 5 1 3 2 4 1 2 2 1 0 9 0 1 0 7 0 22 0 31 14 1 0 0 0 1 1 0 0 39 2 0 20 1 47 ]
G [ 17 16 11 35 8 15 11 24 27 11 8 6 9 2 18 2 7 3 8 4 14 6 22 17 0 1 0 0 0 1 0 0 0 1 1 7 3 2 51 46 0 3 1 0 0 0 0 2 16 0 ]
T [ 10 15 15 6 13 7 26 4 14 5 26 2 9 6 11 3 4 10 7 33 18 31 16 6 49 3 42 1 48 3 41 3 28 3 17 7 2 49 0 0 0 1 52 1 13 51 0 31 30 4 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.01 -0.01 -0.00 -0.00 0.06 0.04 -0.03 0.10 -0.03 -0.02 0.11 -0.04 0.05 -0.01 ]
C [ 0.02 0.02 0.02 0.02 0.03 0.02 0.03 0.03 0.03 0.02 0.03 0.02 0.03 0.01 0.02 0.03 0.01 -0.00 0.02 0.01 0.03 -0.01 0.06 -0.01 -0.03 0.07 -0.06 0.08 ]
G [ 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.03 0.03 0.03 0.03 0.05 0.01 0.10 0.10 -0.05 0.05 -0.00 -0.00 0.05 -0.01 0.00 0.03 0.07 -0.01 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.02 0.01 -0.03 -0.02 -0.01 -0.04 0.09 -0.07 0.04 0.11 -0.06 0.06 -0.01 0.03 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 16909

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_2

Num. of seqlets: 60

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF146) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001212.1 ZNF146 ENCSR689YFA HEK293 Homo sapiens UN0316.1
BP001213.1 ZNF146 ENCSR713IFY K562 Homo sapiens UN0316.1
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)