Detailed information of deep learning profile BP001203.1

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This page shows detailed deep learning-derived predictions and motifs for ETV4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV4
Model ID: BP001203.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0764.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P43268  
Source: ENCSR714YZG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 0.05 0.03 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.03 0.03 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.07 0.06 0.00 -0.00 0.02 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 2616 2642 2681 2671 2742 2672 2619 2557 2623 2593 2495 2734 2563 2486 2634 2568 2405 2581 2443 3390 3201 4859 538 4414 0 1 11677 10259 2319 921 2705 3272 2679 2452 2458 2662 2613 2465 2558 2662 2564 2514 2572 2495 2640 2699 2563 2638 2610 2595 ]
C [ 3288 3268 3221 3292 3329 3211 3246 3365 3278 3182 3347 3219 3329 3357 3238 3341 3656 3492 3300 2940 3012 1969 9539 7254 1 1 11 70 708 3199 1997 2706 3527 2915 3188 3297 2757 3159 3348 3044 3313 3238 3141 3120 3112 3079 3172 3243 3092 3233 ]
G [ 3366 3388 3303 3398 3326 3425 3436 3408 3350 3358 3420 3264 3495 3347 3417 3573 3394 3365 3953 3329 3787 3331 1545 49 11718 11716 25 82 8625 1241 5047 4199 3567 3579 3636 3343 3720 3574 3449 3529 3448 3486 3551 3605 3534 3453 3556 3391 3490 3425 ]
T [ 2449 2421 2514 2358 2322 2411 2418 2389 2468 2586 2457 2502 2332 2529 2430 2237 2264 2281 2023 2060 1719 1560 97 2 0 1 6 1308 67 6358 1970 1542 1946 2773 2437 2417 2629 2521 2364 2484 2394 2481 2455 2499 2433 2488 2428 2447 2527 2466 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 -0.01 0.00 -0.04 -0.02 0.05 0.03 0.01 -0.01 0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.03 0.06 -0.01 -0.02 -0.01 -0.01 -0.00 0.01 0.00 0.01 0.00 ]
G [ 0.01 0.00 0.01 0.01 0.01 -0.01 0.07 0.06 -0.02 -0.02 0.03 -0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 -0.05 -0.03 -0.02 -0.01 0.01 -0.03 0.02 -0.00 -0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2055

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1436

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 945

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 50

CWM

PFM

     

HCWM

1 profiles found for the same TF (ETV4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001202.1 ETV4 ENCSR537FDJ HepG2 Homo sapiens MA0764.4
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